Gene Jann_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2438 
Symbol 
ID3934895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2430998 
End bp2431540 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID637904796 
Producthypothetical protein 
Protein accessionYP_510380 
Protein GI89054929 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0052386 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGGCGCCA TCGGCAACGG TGTCGAGCTT CTGGAAATGA CAGGAAAGGC CGATGGGCCG 
GAGGTGGATC TGATCCGCGA TGCCGTGCGC GCGGCTGAGG CACGCATTCG TCTGTTCCGC
CTTGCCTTTG GCGGCGCCAG TTCCGGTCAG GTCACCAGCC TGCGGGAGGC CAAGACAGTG
GTGGAGGGGT ATTTCCACCA AAGCCGCGTG GCCGTGGTCT GGATGGCCAA CTCTGATCGG
TCGCGTCAGG AAACCAAAAT GGCGCTTCTC ATGCTGCTCT GCGCGGAAAC CGCCCTGCCG
ATGGGCGGCA CGGTGCGCAT CGGTCCGGAC CCGACAGGCC ATTGGCAGTT GGAGGCCACC
GGCCCGCGTC TGAACATGGT GGACGCGGTT TGGGATGTTC TGCGCACGGG CACGGCCCCT
CCCGATGAGC CGCTCAGACC GGCAGATGTG CAATTTCCCA TGCTGTTTCA GGCCGCCCAA
AGCCTGGGCC TGACCTTGAA CTATGTCGCG GATGGAGAGA CGTTTCGGAT GTCGACCGCC
TGA
 
Protein sequence
MGAIGNGVEL LEMTGKADGP EVDLIRDAVR AAEARIRLFR LAFGGASSGQ VTSLREAKTV 
VEGYFHQSRV AVVWMANSDR SRQETKMALL MLLCAETALP MGGTVRIGPD PTGHWQLEAT
GPRLNMVDAV WDVLRTGTAP PDEPLRPADV QFPMLFQAAQ SLGLTLNYVA DGETFRMSTA