Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2438 |
Symbol | |
ID | 3934895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2430998 |
End bp | 2431540 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904796 |
Product | hypothetical protein |
Protein accession | YP_510380 |
Protein GI | 89054929 |
COG category | [S] Function unknown |
COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0052386 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGCGCCA TCGGCAACGG TGTCGAGCTT CTGGAAATGA CAGGAAAGGC CGATGGGCCG GAGGTGGATC TGATCCGCGA TGCCGTGCGC GCGGCTGAGG CACGCATTCG TCTGTTCCGC CTTGCCTTTG GCGGCGCCAG TTCCGGTCAG GTCACCAGCC TGCGGGAGGC CAAGACAGTG GTGGAGGGGT ATTTCCACCA AAGCCGCGTG GCCGTGGTCT GGATGGCCAA CTCTGATCGG TCGCGTCAGG AAACCAAAAT GGCGCTTCTC ATGCTGCTCT GCGCGGAAAC CGCCCTGCCG ATGGGCGGCA CGGTGCGCAT CGGTCCGGAC CCGACAGGCC ATTGGCAGTT GGAGGCCACC GGCCCGCGTC TGAACATGGT GGACGCGGTT TGGGATGTTC TGCGCACGGG CACGGCCCCT CCCGATGAGC CGCTCAGACC GGCAGATGTG CAATTTCCCA TGCTGTTTCA GGCCGCCCAA AGCCTGGGCC TGACCTTGAA CTATGTCGCG GATGGAGAGA CGTTTCGGAT GTCGACCGCC TGA
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Protein sequence | MGAIGNGVEL LEMTGKADGP EVDLIRDAVR AAEARIRLFR LAFGGASSGQ VTSLREAKTV VEGYFHQSRV AVVWMANSDR SRQETKMALL MLLCAETALP MGGTVRIGPD PTGHWQLEAT GPRLNMVDAV WDVLRTGTAP PDEPLRPADV QFPMLFQAAQ SLGLTLNYVA DGETFRMSTA
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