Gene Jann_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2420 
Symbol 
ID3934877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2417611 
End bp2418264 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID637904778 
Productglutathione S-transferase-like 
Protein accessionYP_510362 
Protein GI89054911 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.608511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0917886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACT TTCACACGCA CGCGACACCC AACGGCTTCA AGGTCGCCAT CGCGCTTGAA 
GAAATGGGCC TTCCCTATGA CGTTCACCTT GTGGACATGC GCGCGGGCGA ACAGTTCGCA
CCCGAATTTG TCGCCATGAA TCCCAATGCG AAACTGCCGG TGATCGTTGA TCACGACACG
GGAACGACAG TCTACGAATC CAACGCCATT CTTGAATACC TCGCGACAAA GACCGGACAA
TTGATGCCCG CGCAGACCGA TGCAGATTAT TGGGAAGCCC GTCAGCTTCT GTACTTTCAG
GCGGCGTCCG TCGGGCCATT CTTCGGCCAA CGCATGCACT TCTCCTACCT CGCGCCGGAA
ACGGTGCCCT ACGGCATTGC GCGCTATGAA ACCGAGGGGG CACGGTTGCA GAAAGTCATG
GACGATATGC TGGTAGGCCG TGATTATTTC CTCGCCAGTG GATATTCTAT CGTCGATATC
GCACTGCTCG GGTGGTACAT GACTGCCGTT CTGGCTGGGT ATGACGATCC GGCCCACAAG
AACCTCGCGG CTTGGCATCA ACGGGTTTCT GATCGTCCGG CCGTGCAGGC GGGCCTTGGC
GTGCCGATGC GCCGCGATCC TTCACAACTT CCACCGCGCA AGGTGGTATC GTGA
 
Protein sequence
MIDFHTHATP NGFKVAIALE EMGLPYDVHL VDMRAGEQFA PEFVAMNPNA KLPVIVDHDT 
GTTVYESNAI LEYLATKTGQ LMPAQTDADY WEARQLLYFQ AASVGPFFGQ RMHFSYLAPE
TVPYGIARYE TEGARLQKVM DDMLVGRDYF LASGYSIVDI ALLGWYMTAV LAGYDDPAHK
NLAAWHQRVS DRPAVQAGLG VPMRRDPSQL PPRKVVS