| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2371 |
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| Symbol | |
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| ID | 3934827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2375278 |
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| End bp | 2377473 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904729 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_510313 |
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| Protein GI | 89054862 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0872233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.570459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CCGACATCAT CTATACCAAA GTTGACGAGG CGCCGGAGCT GGCGTCGGCC
TCCCTTTTGC CGATCATCCA ACGGTTTGCG AAGGCCGCAG GGATCAGCGT GGGCACCCGG
GATATCAGTC TTGCGGGTCG GATCCTGGCC ACGTTCCCCG AGAACCTGAC AGACGATCAG
CGCATATCCG ATGATCTGGC CGCGCTAGGA GAGTTGGTGA AAACCGCCGA GGCCAACGTG
ATCAAGCTGC CCAACATCTC GGCCTCCGTG CCGCAGCTGG TCGCCGCCGT GACGGAGCTT
CAGGGCAAGG GTTTCGCGAT CCCCGATTAC CCGGAAACCC CTGAAACGGA TGCAGAAAAG
GCTATCCGCG CGCGCTATGA TGCGATCAAA GGCTCGGCCG TGAACCCGGT GCTGCGCGAA
GGCAATTCGG ACCGCCGCGC GGCCGCCGCC GTCAAGACCT ACGCCCAGAA CAATCCGCAC
CGCATGGGGG CCTGGAGCGC AGACAGCAAG ACCCGTGTGG CGTCGATGTC GGGCGGTGAT
TTCTTCTCCA ACGAGACCTC GGTGACGCTG GCCGAGGATA CCCATGTCCA GATCGTGCTG
GAGACCGCTG GCGGTGACAA GATCCTGAAA GACGGCCTGT CCTACCCCGC AGGTACCGTG
CTGGACGCGA CCTTCATGAG CGCCGCAGCC CTTGGTGCCT TCCTGGCCGA CGAGATCGAG
AAAACCAAGG CCGAGGGCGT GCTGTTCTCT CTGCATATGA AGGCCACGAT GATGAAGGTG
TCGGACCCGA TCATCTTTGG CCACGCGGTC AAGGCCTGGC TCGCGCCCGT TTTCGATCAG
TTCAGCGAAG AGTTGAAAGC CGCAGGCGTA AACCCCAATT CCGGCATGGC CGATCTTCTG
GCCCGGGTCG CCGACCACCC CGAGATCCTC GCCGCGATTG AAGAGAACCG GGCCAACCGC
CCGCCGATGT ATATGGTGAA CTCTGACAAG GGCATCACCA ATCTGCACGT GTCATCCGAT
GTGATCATTG ACGCCTCCAT GCCTGCGTTG ATCCGGGCTG GTGGCAAGGG CTGGGGGCCG
GATGGCGAAG AGCATGACGC CGTCTGCGTC ATCCCCGACA ATTCCTATGC GCCGGTCTAT
GATGAGGCGA TCACCTTCTT CAAAGGCAAC GGCGCGCTGG ATCCCGCCAC CGCAGGCACC
GTGCAGAACC TGGGTCTGAT GGCGCAAAAG GCGGAGGAAT ACGGCTCCCA CCCCACAACG
TTTGAGATTG CGGAGGCGGG CATTGTCAAA ATGATCGCGG GCGATGGCAC GGTGCTGCAT
TCCCATGAGG TGCAGGCGGG CGATATCTGG CGCTCAGCCT CCGCGCGCAA GGCCCCGATT
GAGGATTGGG TGCAGCTGGC CATTGCGCGC CAGAAGGCCA CCGGCTACCG CGCGATCTTC
TGGCTCGACG CCGACCGGGC CCATGATGCG GAGTTAATCT CATACGTGAA GCCCATCCTG
CAAGACTCTG GTGTTGAAGA TAAATTTGAG ATCATGACCC CGCGTCAGGC GACCCGCGCG
TCGTTGGAGA CAATCACCAA GGGCGAGAAC ACCATCGCCA TCACCGGCAA CGTGCTGCGG
GACTATCTGA CGGATCTGTT CCCGATCCTG GAACTGGCAA CCTCGGCCAA GATGCTGTCC
ATCGTGAAGC TGATGCAGGG CGGCGGTTTG TTTGAAACCG GTGCCGGTGG ATCGGCCCCG
AAACACGTCC AGCAGTTGCA CTCCGAAGGG CATCTGCGGT GGGACAGCCT CGGTGAATTC
TGCGCCCTGG GCGAGTCCCT CACCTTTCTG GCGGACGCAA AGGGCAACGC GAAGGCTCGC
GTGTTGGGCG CGGCGGTTGA TACCGCGACC CAAGGCATTC TGGATGACAA CCGCTCTCCG
GGGCGCAAGG TCGGCCAGCC GGACAACCGC GACAGCCATT ACTGGTTCGC CCGCTACTGG
GCCGAAGCGC TTGCCGCGCA GTCCGAGGAC GCAGACATGG CCGCAGAGTT CGCGCCATTG
GCACATGCAT TGGCCGAGAA TGAGGCCACG ATCCTGGCGG AGCTGGATAC CGGCGAAGGG
TCGGAGGCCG ACACTGGCGG ATACTACCTA AACGATCCCG CGAAGCTGGA GGCCGTCATG
CGGCCAAGTG CGACGCTGAA CGGGATTATC GGGTAG
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| Protein sequence | MTTPDIIYTK VDEAPELASA SLLPIIQRFA KAAGISVGTR DISLAGRILA TFPENLTDDQ
RISDDLAALG ELVKTAEANV IKLPNISASV PQLVAAVTEL QGKGFAIPDY PETPETDAEK
AIRARYDAIK GSAVNPVLRE GNSDRRAAAA VKTYAQNNPH RMGAWSADSK TRVASMSGGD
FFSNETSVTL AEDTHVQIVL ETAGGDKILK DGLSYPAGTV LDATFMSAAA LGAFLADEIE
KTKAEGVLFS LHMKATMMKV SDPIIFGHAV KAWLAPVFDQ FSEELKAAGV NPNSGMADLL
ARVADHPEIL AAIEENRANR PPMYMVNSDK GITNLHVSSD VIIDASMPAL IRAGGKGWGP
DGEEHDAVCV IPDNSYAPVY DEAITFFKGN GALDPATAGT VQNLGLMAQK AEEYGSHPTT
FEIAEAGIVK MIAGDGTVLH SHEVQAGDIW RSASARKAPI EDWVQLAIAR QKATGYRAIF
WLDADRAHDA ELISYVKPIL QDSGVEDKFE IMTPRQATRA SLETITKGEN TIAITGNVLR
DYLTDLFPIL ELATSAKMLS IVKLMQGGGL FETGAGGSAP KHVQQLHSEG HLRWDSLGEF
CALGESLTFL ADAKGNAKAR VLGAAVDTAT QGILDDNRSP GRKVGQPDNR DSHYWFARYW
AEALAAQSED ADMAAEFAPL AHALAENEAT ILAELDTGEG SEADTGGYYL NDPAKLEAVM
RPSATLNGII G
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