| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2358 |
|---|
| Symbol | |
|---|
| ID | 3934814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2363345 |
|---|
| End bp | 2364637 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637904716 |
|---|
| Product | SufBD |
|---|
| Protein accession | YP_510300 |
|---|
| Protein GI | 89054849 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.14407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTC CTGCCGCAAA GCCTGACCTG ACCGAGGCGC GCCTTGCCGC GCTGTCGATG
CCCGATGGCG CGCCGGAGGC CCGAAAGGCC GCGCTGGCCC GGGTCCGCGA AATGGGCCTG
CCCACCCGCC GCGATGAATA TTGGCGCTAC ACCGACCCGT CGTCCCTGAC CCAGGCTGGG
GCGCCGCGCG CCGCTGTGTT TCATGATCCG AACGAAGCGC CGCTGTTCAA AGACATTGAC
CGCCTGAAGG TTGTGTTCGT GGACGGCGTG TTCGATGCAG AGAAGTCTGA TGACCTCTCC
ATAGCGGGTC TGGAGATTGA GCGTTTGGCG GATGTGTTGT CGAAAGACAT CCACTGGGCC
AAGGATCTGT ACGGCACCCA GGAGGCGGCG GGGCAGGACC CCGTTGCGCG CCCGCTGGCC
GCCCTCAACA CAGCGTTTGC AACCGACGGG ATCGTCATTC GCGCGACGGC CAAGGCCGAA
AAACCCGTGG CGCTGATCTA CCTTCACCGC GATGAGACAT CCGACGCGAT CCTGCACCAT
CTGGTTCGGG TCGAGACGGG GGCCGAGTTG ACCGTGCTGG AAGTGGGCCC GGCAGCCGCG
CGCTTCAACA AATGCATGGA GATCGACGTG GCCGACGGCG GCGCGTTCCA CCATGTGCGC
GCCCAGGGTC GTGACCATGA GCGCCGCGCC GTGACGCATA TGTTTGCCCG TGTGGGGGAG
GAGGCGCTGT ATAAGTCCTT CACCACCACC GCCAACGGCG TGACAACGCG CAACGAGCAT
GTCATTGAAA TCGTAGGTAA TAATGCCGTA GCCCATGTGG CCGGTGCAGC ACTTGGCGAT
GCCAGAAACG CCGCCTTCCA CCATGACGAT ACCGTTTTCA TCACCCACGA TGCGGTCAAT
TGCGAAAGCC GTCAGGTGTT CAAGAAGGTT CTGCGCAACG GGGCGGAGGG GGTCTTTCAG
GGCAAAATTC TTGTCAAGGA AGGCGCTCAG AAGACGGATG GCTATCAGAT CAGCCAGGCG
CTTTTGCTGG ATGACGACAG CAGCTTTCAG GCCAAGCCGG AATTGGAGAT CTACGCCGAC
GATGTGATCT GCTCCCACGG GTCGACCACC GGGGCGATTG ACGAAGAGGC GCTCTTTTAC
CTGCGCTCGC GCGGCTTGCC GACGGATCAA GCGACGGATC TTCTGGTTCT CGCGTTTCTG
GCCGAGGCGA TCGAGGAAAT CGCCGATGAG GCGTTGCGCG ACGATGTCTT GGCGCGCCTG
GAGGAATGGC TGGTGCGCAG GCGGCACGGG TAA
|
|---|
| Protein sequence | MAAPAAKPDL TEARLAALSM PDGAPEARKA ALARVREMGL PTRRDEYWRY TDPSSLTQAG
APRAAVFHDP NEAPLFKDID RLKVVFVDGV FDAEKSDDLS IAGLEIERLA DVLSKDIHWA
KDLYGTQEAA GQDPVARPLA ALNTAFATDG IVIRATAKAE KPVALIYLHR DETSDAILHH
LVRVETGAEL TVLEVGPAAA RFNKCMEIDV ADGGAFHHVR AQGRDHERRA VTHMFARVGE
EALYKSFTTT ANGVTTRNEH VIEIVGNNAV AHVAGAALGD ARNAAFHHDD TVFITHDAVN
CESRQVFKKV LRNGAEGVFQ GKILVKEGAQ KTDGYQISQA LLLDDDSSFQ AKPELEIYAD
DVICSHGSTT GAIDEEALFY LRSRGLPTDQ ATDLLVLAFL AEAIEEIADE ALRDDVLARL
EEWLVRRRHG
|
|---|
| |