| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2311 |
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| Symbol | |
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| ID | 3934767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2315961 |
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| End bp | 2316746 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904669 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_510253 |
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| Protein GI | 89054802 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.146201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATCA CCACTGACTT GTCCGGCAAG ACCGCCGTGA TCACCGGATC GAACTCGGGA
ATCGGGTTGG GGGTTGCGCG GGAACTGGCC CGCGCCGGCG CGAATGTCGT TCTGAATTCC
TATACTGACA CCAAGAAAGA CCATGCGTTG GCCGAAGAGA TCGCCGCCAA CTTCAGCGTC
GATGCCCGCT ATATTCAGGC GGACCTGTCC AAGGGCGATC AGGCCCGGGG TCTGATCGAG
GAGGCGGGCG TCTGCGATAT CCTGATCAAC AATGCAGGCA TCCAGCACGT CGCCCCCATA
GATGAGTTTC CGGTGGAGAA ATGGGATGCG ATCATTGCGA TCATGCTGTC CTCGGCCTTC
CACACCACGG CCGTGGCTCT GCCGATGATG CGCGACGCCG GCTGGGGCCG GGTCATCAAC
ATCTCCAGCG CCCATGGCTT GACCGCGTCG CCCTACAAAT CGGCCTATGT GTCGGCCAAG
CACGGCGTTG TCGGCATGAC CAAGGTTGTC GCCCTTGAGA CCGCGAAAGA GCCCATCACC
GCCAATGCCA TCTGCCCAGG CTACGTTCTG ACCCCGCTGG TGGAGAGCCA GATCCCCGAC
ACGGCGAAGA AATACGACAT GTCGGAGGAG GAGGTGAAGC AGAAGGTCAT CCTGGAGCGC
CAACCCTCCA AGGAATTCGC CACGACCGAG CAGTTGGGCG GCACCGTCGC CTTCCTCTGC
TCTGCCGCCG CCGATCAGAT CACTGGCACC ACCATCAGCG TTGACGGAGG ATGGACAGCG
TTGTGA
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| Protein sequence | MAITTDLSGK TAVITGSNSG IGLGVARELA RAGANVVLNS YTDTKKDHAL AEEIAANFSV
DARYIQADLS KGDQARGLIE EAGVCDILIN NAGIQHVAPI DEFPVEKWDA IIAIMLSSAF
HTTAVALPMM RDAGWGRVIN ISSAHGLTAS PYKSAYVSAK HGVVGMTKVV ALETAKEPIT
ANAICPGYVL TPLVESQIPD TAKKYDMSEE EVKQKVILER QPSKEFATTE QLGGTVAFLC
SAAADQITGT TISVDGGWTA L
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