| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2277 |
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| Symbol | |
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| ID | 3934732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2283967 |
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| End bp | 2284746 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904634 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_510219 |
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| Protein GI | 89054768 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGG GAATTGCAGG GCGCAAGGCG ATCGTCTGCG GATCATCACG CGGCCTTGGG
CGCGCCTGCG CCGAGGCGTT GCTGCGCGAA GGCGCGGAGG TTGTACTCAA CGGGCGTGAC
GCACACGCAT TGGACGTCTT GTCAGATGAA CTGTCGCGGC AAACCGGCCA GAAAGCCACG
GCCGTAGCCG CTGATCTGAA CACCGAAGAC GGGCGTGAGC GCCTTTTGGC CGCCTGTCCG
GCTCCGGACA TTCTTGTGAA CAACAACGGC GGACCGCCCT TCAAGGACTT CCGCGATCTG
GATCGAGCCG CGATGGAGCG GGGTGTGGCC ATGAACATGC TGACCCCCAT CGAATTGATC
CAGCGCGTGA TCGATGGCAT GGCGGCGCGC GGCTTTGGCC GCATCGTCAA TATCACCTCA
ATCTCGGTCA AAATGCCGGT CTCTGGCCTC GATCTGTCCA GCGGCGCGCG GGCGGGTCTG
ACGGCGTTTT TGGCAGGCGT TGCGCGCGAC TACGCAAACC AGGGCGTCAC GATCAACCAA
CTTCTGCCCG GCTACTTTCT GACCGAGCGC TTGCAGGAAG GCTTCAATGC CCAGGCCAGT
CAAACTGGCG CAGCCCCGGC CGATGTGGCG CAAAGCTGGA CCGATCAAGT GCCCGCTGCC
CGTCTTGGCG ACCCATTCGA GTTCGGCCAA ACCTGTGCCT ACCTTTGCGG CACGCAAGCG
GGCTACATCA CCGGGCAGAA CATCCTGATG GATGGCGGAC TCTATAGAAG CGCTTTCTAA
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| Protein sequence | MDLGIAGRKA IVCGSSRGLG RACAEALLRE GAEVVLNGRD AHALDVLSDE LSRQTGQKAT
AVAADLNTED GRERLLAACP APDILVNNNG GPPFKDFRDL DRAAMERGVA MNMLTPIELI
QRVIDGMAAR GFGRIVNITS ISVKMPVSGL DLSSGARAGL TAFLAGVARD YANQGVTINQ
LLPGYFLTER LQEGFNAQAS QTGAAPADVA QSWTDQVPAA RLGDPFEFGQ TCAYLCGTQA
GYITGQNILM DGGLYRSAF
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