Gene Jann_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2273 
Symbol 
ID3934728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2279714 
End bp2280193 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID637904630 
ProductMarR family transcriptional regulator 
Protein accessionYP_510215 
Protein GI89054764 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.123846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACG ACCATTCAGC CCCGACACCA AGACCTCGGC GCCCATTGGA AGACCGCGTG 
TCGTTTCTGA CCCACAGGAT CAACGCGCGG TTGCAGCAGT TGAGCACGCC GATCCTGACA
CCGCTGAAGC TCGACCTCTA TTCGTCCCGG ATCATCGTGG CGCTGGCCGA GCGGGGACCA
CTGAAAGTTG GACAATTGGT CGATCTCATG GCCCTGCCCC AATCCACGAT GTCCCATCAG
TTGAAGCGAA TGGAGAAAGA CGGCTACGTG CAGCGCACGC GTTCGGACAC GGATAACCGC
ACGGTTGTCA TCACGCTGAC GGACGAGGGT GAAACGGTGT CGGAGACCTG TAATCGCTGG
AGCGATCAGG TGCTGAATTC GGTGTCCGAG GAATTGTCCG ACAGTGAGAT CGAAGCGCTG
AGCGCCCTGT TACAGCGCGT CTTTAAGAGC CTCCCGCAGG AGGGTGACAT CCAGCTCTGA
 
Protein sequence
MSHDHSAPTP RPRRPLEDRV SFLTHRINAR LQQLSTPILT PLKLDLYSSR IIVALAERGP 
LKVGQLVDLM ALPQSTMSHQ LKRMEKDGYV QRTRSDTDNR TVVITLTDEG ETVSETCNRW
SDQVLNSVSE ELSDSEIEAL SALLQRVFKS LPQEGDIQL