| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2271 |
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| Symbol | |
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| ID | 3934726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2277670 |
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| End bp | 2278413 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904628 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_510213 |
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| Protein GI | 89054762 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.807678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG CTTTGGTAAC CGGCGGCAGC GGCGACATAG GCCGCGCCAT TGGGCAAGTC
CTGATCGACG ATGGCTACCG CGTGGGCCTG CTTGATCTGG ATCAGGCAGA CGTGAGGACT
GCGGCTGAGG ACCTAGGCGC AACGGGTCTG GTGGCCGATG TGACGAACGA GTCCGATGTT
GAGCGCGCGA TTGCCGACTT CGGCGCGGTT CCGGACCTGG TGGTGAACAA CGCAGGGATA
GGCCGGTTTG CCTCACTTCT GGACATGGAG ATCGAGACGT TCCGCCGCCA GCTTGACGTC
AACCTGACCG GCGCTTTCAT CGTCGCTCGC GCGGCAGCCA AGGGAATGGT GGAACGTGGG
TCCGGCGTCA TCCTGAACAT CACCTCCATC AACGCAATCA CCACGGGGCC CGGCACCGGG
TCCTATCCGG CAGCCAAGGC GGGCCTCGCA AAACTGACCG AGATGATGGC GTTGGAATGG
GGCCCACTGG GTGTGCGCGT CAACGCCATT GCACCGGGCT TTATCGATGC GGGTATCTCG
ACGCCGTTCT ACGCTGATCC GGCAGTGCGC GCCTCGCGCG GGGGGGCCGT GCCGTCGCGA
CGCTTGGGCG TGTCCGAGGA TATTGCCAAC GCCGTGTCCT ACCTCGCCAG CGACAAGGCG
AGTTACGTGA ACGGGCACCA CCTCGTGGTC GACGGTGGTG TCTCGGTCAG CTTGCTAACG
CAGCTGCCAC GGGTCGCAAC ATGA
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| Protein sequence | MKTALVTGGS GDIGRAIGQV LIDDGYRVGL LDLDQADVRT AAEDLGATGL VADVTNESDV
ERAIADFGAV PDLVVNNAGI GRFASLLDME IETFRRQLDV NLTGAFIVAR AAAKGMVERG
SGVILNITSI NAITTGPGTG SYPAAKAGLA KLTEMMALEW GPLGVRVNAI APGFIDAGIS
TPFYADPAVR ASRGGAVPSR RLGVSEDIAN AVSYLASDKA SYVNGHHLVV DGGVSVSLLT
QLPRVAT
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