| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2218 |
|---|
| Symbol | |
|---|
| ID | 3934672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2224674 |
|---|
| End bp | 2225192 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637904575 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510160 |
|---|
| Protein GI | 89054709 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.450386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG ATCATTCGAT CCTCGATGCC GTCGCGAAGG GCGCAGTGTT GAGTGCTTTG
GGCATCAGCT GGGTCATCCT TTTGGTGCGT TTCGTCGGAC TTCGGTCATT TTCAAAGATG
ACCAATTTTG ACTTTGTGAT GACCGTCGGC ATGGGGTCGC TTCTGGCCAG TGCTGCCACG
ACGAGCGACT GGGCAGCGTT GGTCCAGACG ATGACCGCCA TGGCCGCGCT GTTTTGCATT
CAGTTCTGTG TCGCTTTCCT GCGCCAGCGG TCCGATGCAG TCGACGCGGC GCTGCAAAAC
CAGCCAATGC TCCTGATGCG GGACGGCCAG ATCCTGCATG ACGCCCTGCT CAAGACCCGG
GTGACGGAAG AAGACCTAAT GGCCAAACTG CGGGAGGCGA ACGCGCTGGA CCTGACACAG
GTGCGCGCCG TTGTGCTTGA GGCGACCGGG GACGTCTCCG TGCTTCATGG CAGCCAGGTC
GATGAAACGC TGCTGAAAGG CGTGGCTTCA CCAACTTAG
|
|---|
| Protein sequence | MFFDHSILDA VAKGAVLSAL GISWVILLVR FVGLRSFSKM TNFDFVMTVG MGSLLASAAT
TSDWAALVQT MTAMAALFCI QFCVAFLRQR SDAVDAALQN QPMLLMRDGQ ILHDALLKTR
VTEEDLMAKL REANALDLTQ VRAVVLEATG DVSVLHGSQV DETLLKGVAS PT
|
|---|
| |