Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2200 |
Symbol | |
ID | 3934654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2210286 |
End bp | 2211044 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904557 |
Product | hypothetical protein |
Protein accession | YP_510142 |
Protein GI | 89054691 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTAT TCGCACAAGG AATTTTTTTT GCACAGCAAT ATCAACTTCT TACTCGCTCA ATTGATAATC GAGTGGGAAT AAGGGGTCTT GGCCGCTTCG TCGGGCGTGT GATCCTTGCC GGGATCGCGG CATACGCTCT GATCCTGAGC GGGTTGGCCG TCTACATCGC TGCCGCGCCC GGTGAACCGC CGGTGCCAGA GGCCCATGAC GCGATCATCT GCCTTGGTGC GGGTCTGTCG CCCACCCAAG GTCCCGATCA TGCCGGTCCG GCCTCGCGCG CGCGGGCTGT AACCTGTGCG GGGCTTTATG GTGCAGCTGT AGCCCCCTTG GTGGTGGTCA CGGGCGAGGG CATCGCCGAT TATCCGGTCT CCACGGCCAT GGCACGGGTC CTTATGGATC ATGGTGTGCC CGAGCACGCG ATCGTCAATG AGCCCGCCGC CGGATCCACA ATCCAGAACG CTGCGTTCAG CGTGCCGCTT TTGCCGACAG AGACGACACG CGTCGTGCTG GTCACACAGC GCTTCCACCT GCCGCGCGCG ATTGCGACGT TTCGGATCTT CACGCCGTGG GAGGTGACGG GATATGAGGC GCCACTTCCG GGACAGGATG CGGTCGCGGT TCACGAACGC CGCACGCCCA CCCGGTGGCT CCTGCGGGAG GTGGCCGCCT ATGGGTCAAA CGCCGTCCGG GTGATGGTCT TTGTGATCAC TGGCAGTGTT GGCATTGACC GCGATACGCG GATCGGCTGG TTCAACTAG
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Protein sequence | MTVFAQGIFF AQQYQLLTRS IDNRVGIRGL GRFVGRVILA GIAAYALILS GLAVYIAAAP GEPPVPEAHD AIICLGAGLS PTQGPDHAGP ASRARAVTCA GLYGAAVAPL VVVTGEGIAD YPVSTAMARV LMDHGVPEHA IVNEPAAGST IQNAAFSVPL LPTETTRVVL VTQRFHLPRA IATFRIFTPW EVTGYEAPLP GQDAVAVHER RTPTRWLLRE VAAYGSNAVR VMVFVITGSV GIDRDTRIGW FN
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