Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2177 |
Symbol | |
ID | 3934631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2185441 |
End bp | 2186265 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637904534 |
Product | hypothetical protein |
Protein accession | YP_510119 |
Protein GI | 89054668 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00465003 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAT TAGCTGAGTT TTTGCCGATG CTGGCGCTGA TCCTTGCGAT TGGGGCCATG GCCGGCGTTA TCGCGGGCCT TCTTGGCGTG GGCGGCGGCA TTGTCCTGGT GCCCGCGTTC TTCTTTGCCT TTGAAGGGCT TGGATACAGC ACCGATGGGT TGATGCAGAT CTGCCTTGCC ACGTCGCTGG CCACGATTGT GGTGACGTCG GTCAGGTCCG TCATGGGCCA CCACAAGAAG GGGGCGGTGG ACTGGGATAT CCTGCGCGCC TGGGGGCCGG GCATCGCCAT CGGCGCGGCT TTGGGTGTCA TCGTGGCCAG TGGCCTCCGC AACGAAGTGT TGATGGCCAT TTTCGGTGTT CTGGGTCTTG GCGTGGGCCT TTACATGGCG CTTGGACGGT CTGAGTGGCG GTTGGGCGAC CAGATGCCCG GAGCCTTCGG CACCATCGCC TCATCGCCGG TCCTGGGGTT TCTGTCGGTC CTGATGGGGA TTGGCGGCGG GTCCTTCGGG GTACCGATGA TGACGCTGTT TGGCGTGGCG ATCCACCGGG CGGTGGCGAC GGCGGCGGGC TTCGGTGTGA TCATCGCGGT GCCTGCGGTC ATTGGATTTC TTCTGACGGG CAGTGATGTG GCCAACCGGC CGCCCTATGC TGTGGGCCAG GTCAATATCG TGGCCTTCGT GGCCGTCATC GCGATGACGC TGATCACCAC GCCATGGGGC GTGAAGCTGG CCCATGCGAT GGACCCCAAA CCGCTCAAGC GCGTCTTTGC GGTCTTCATC ATGATCATGG CGCTCAACAT GCTGCGCAAG GCCTCTGGTT ATTGA
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Protein sequence | MPELAEFLPM LALILAIGAM AGVIAGLLGV GGGIVLVPAF FFAFEGLGYS TDGLMQICLA TSLATIVVTS VRSVMGHHKK GAVDWDILRA WGPGIAIGAA LGVIVASGLR NEVLMAIFGV LGLGVGLYMA LGRSEWRLGD QMPGAFGTIA SSPVLGFLSV LMGIGGGSFG VPMMTLFGVA IHRAVATAAG FGVIIAVPAV IGFLLTGSDV ANRPPYAVGQ VNIVAFVAVI AMTLITTPWG VKLAHAMDPK PLKRVFAVFI MIMALNMLRK ASGY
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