| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2154 |
|---|
| Symbol | |
|---|
| ID | 3934608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2162565 |
|---|
| End bp | 2163341 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637904511 |
|---|
| Product | short chain enoyl-CoA hydratase / enoyl-CoA hydratase |
|---|
| Protein accession | YP_510096 |
|---|
| Protein GI | 89054645 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.182629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG AGACCATCAC TGCCGTCACC CGCGACGGCG CGGCTGTCAT CACCCTCAAC
CGTCCCGATG TGATGAACGC GCTCAACACG CAGATGCGCG CCGAGATCAC CCACGCGGTT
GGCGTTGCGG CGCAGGAGGC GCGGGTTGTG GTGCTGACGG GCACGGGCCG CGCGTTCTGC
TCGGGCCAGG ATCTGGGGGA CCGCGCCAAT GCGGGCAACC TGAACCTGGA GCGGACGCTG
CGGGATGAGT ACATCCCCAT GCTCAACGCC ATCACCGACT GCCCCGTCCC GGTCATTGCC
GCCGTCAATG GCACGGCTGC GGGGGCGGGG GCCAACCTCG CGCTGGTCTG CGATATCGTC
ATCGCCGCCG AGAGCGCGTC GTTCATCCAG GCCTTCTCTC GTATCGGGCT GATCCCCGAT
GCGGGGGGCA CGTGGGCGTT GCCGCGCACC ATCGGGCTTC AGCGTGCCAT GGGGGCGGCC
TTGTTCGCCG AGAAGATCAC CGCCGCCCAG GCCGCTGAGT GGGGGATGAT CTGGGAGATG
GCCTCTGACG CGGAGTTTGA GGCCACATGG ATGGCCCGCG CCACCCATCT TGCCACGGGT
CCGACGGAGG CGTTCAAGCG GATCAAGCAG GTGATGCGAG CAAGCTCTGG CAACTCCCTC
GAAGAGCAGC TTTTGCTGGA GGGTCAGTTG CAGGGCCAAT GCGGCAAAAG CCGGGATTTC
AAAGAGGGTG TCGTGGCCTT TCTGGAAAAG CGGCCCGCGG TGTTCGAGGG GCGTTAG
|
|---|
| Protein sequence | MNYETITAVT RDGAAVITLN RPDVMNALNT QMRAEITHAV GVAAQEARVV VLTGTGRAFC
SGQDLGDRAN AGNLNLERTL RDEYIPMLNA ITDCPVPVIA AVNGTAAGAG ANLALVCDIV
IAAESASFIQ AFSRIGLIPD AGGTWALPRT IGLQRAMGAA LFAEKITAAQ AAEWGMIWEM
ASDAEFEATW MARATHLATG PTEAFKRIKQ VMRASSGNSL EEQLLLEGQL QGQCGKSRDF
KEGVVAFLEK RPAVFEGR
|
|---|
| |