| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2086 |
|---|
| Symbol | |
|---|
| ID | 3934539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2095009 |
|---|
| End bp | 2097243 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637904442 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_510028 |
|---|
| Protein GI | 89054577 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.486214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAG CCTCAGCCCG CCTGTCCGTT CAAGGTCTGA ACTGCGCGTC ATGCGTGGGT
CGGGTGGAGC GTGCATTGGC CGCTGTGCCG GGCGTGGGCG AGGTGGCAGT GAACCTGGCG
ACGGAGACGG CGCAGGTGGG CTTCGACGCT GATCAGGTCA GTGCGGCGGC GTTGGCCAGC
GCCTCGTCTG AGGCTGGATA TCCGGCCGAG GTGATCACCA GCGTCACCGC TCAGGCCTCG
GACAAGACGG AGGAGATGCG GGGTGCCTTC ACCCGCATGT GGATCGCCCT GGCGCTCACA
CTGCCAGTGT TCGTTCTGGA AATGGGGGCG CATCTCGTGC CCGCGATCCA CCACGCGATT
GGCGCGTCGA TCGGGATGCA AGGGTCCTGG CTTGTGCAAT TCGCCTTGAC CGGGGCCGTG
CTGGCGGGGC CGGGGCGCGT GTTTTTCCGC CTTGGGGTGC CAGCACTGGT CAAGCGCGCG
CCGGACATGA ACAGCCTTGT GGCTTTGGGC ACGGGCGCGG CGTTCGGTTA CTCGGCCCTG
GCCACGTTCG CCCCAGACCT GTTGCCCGCC GCCTCCCGGG CCGTCTATTT CGAGGCAGCC
GCCGTGATCG TCACGCTGAT CCTTCTGGGC CGCGCGTTGG AGGCCCGCGC CAAGGGGCGC
ACGGGAGCCG CGATCCGCGC GCTGATCGGT CTTCAGGCCC GTGAGGCGCG GGTGATGCGC
GCGGGCGGGA TAGAGGATGT GTCGATCGAC GCGCTGGCCG TGGGCGATAT CATCGTCCTG
CGCCCCGGAG AGCGGGTGCC GATGGATGGA GCGGTCACGC AGGGTACATC CTTCGTGGAC
GAGGCGATGA TCACCGGAGA GCCGGTTCCT GTCGAGAAAA CAACGGGATG TGCCGTCACG
GGCGGAACAG TGAACGGGGC AGGGTCTCTG CATCTGCGCG CCACCCGTGT GGGTGCGGAC
ACGACCCTGG CGCAGATCAT CCGTATGGTG CAGGAGGCCC AGGGCGCCAA ACTGCCGATC
CAGGCGCTGG TGGACCGGGT GACACTGTAT TTCGTGCCTG CTGTCATGGT CGTCGCCGCG
GTGACGGTGC TGGCCTGGCT GATCTTTGGT CCCGAGCCTG TGGTGACTTA TGCGCTGGTC
GCCGGTGTCT CTGTCCTGAT CATCGCCTGC CCCTGTGCGA TGGGGTTGGC GACGCCGACC
TCGATCATGG TGGGGACGGG ACGGGCGGCG GAACTGGGCG TGTTGTTCCG AAAAGGTGAT
GCGCTACAAG GCCTCGCGGG CGTTCGGGTG GTGGCACTGG ACAAGACGGG CACCGTGACG
GAGGGGCGGC CAGAGGTCGT CGATGTGGCG CTGGCCGACG GCTTTACGCG TGACGACGTG
ATGACCTTGG CAGGTGCCGC CGAAGCGGCG TCGGAGCACC CGATTGCCAG CGCCATCGTG
CGGGCGGCGA GAAGCGAGGC CGTCGCCAGC GATATCGAGG TCGCGCTGGG GCGTGGTCTG
CGCGCGAATG TGGAAGGACG CGCCGTCGCC ATTGGCTCTG CGCGGTTCCT GCGTGATGAG
GGGATCGACT GCACCGGGTT CAATGAGGCA GTGCACACTG CGCGGGGCGA AACGGTCGTC
TTCGTTGCCG TTGACGGTGC GCTTGCGGCG ATGATCGCCG TGGCCGACAC CGTGAAACCG
TCAAGCGCTG CGGCGATCCA GGCGCTCAAG CAGAAGGGCC TGCGCGTGGC CATGATCACG
GGCGATACCA GGGCGACCGC GCGGGCGATT GCGGACCGGC TTGGCATCGA CGAGGTGGTG
GCAGAGGTTC TGCCGGACGG GAAGGTGGAC GCGCTGGCCA CACTGCGCGC CCATGGCCCC
GTCGCATTCG TGGGCGACGG CATCAACGAC GCACCAGCGC TGGCCCATGC CGACGTGGGA
ATTGCCATCG GGACCGGCAC GGATGTGGCG ATTGAAAGTG CCGATGTGGT GCTGATGTCC
GGGGATCTGG CGGGCGTCGC CACGGCGATC GAGGTGTCAA CAACCACAAT GGCGAACATC
CGGCAGAACC TTGGATGGGC CTTCGCCTAT AATACGGGGC TTATCCCACT GGCGGCGGGG
GCTCTCTATC CGGTCACCGG CCTGCTTCTG TCGCCCGCTT TTGCGGCGGG AGCGATGGCG
TTGTCGAGTG TCTCCGTTCT GGGCAACGCG CTGCGGCTCA GGCGGATGGG CCGCCGGCAG
GGACAGGTAT CATGA
|
|---|
| Protein sequence | MSTASARLSV QGLNCASCVG RVERALAAVP GVGEVAVNLA TETAQVGFDA DQVSAAALAS
ASSEAGYPAE VITSVTAQAS DKTEEMRGAF TRMWIALALT LPVFVLEMGA HLVPAIHHAI
GASIGMQGSW LVQFALTGAV LAGPGRVFFR LGVPALVKRA PDMNSLVALG TGAAFGYSAL
ATFAPDLLPA ASRAVYFEAA AVIVTLILLG RALEARAKGR TGAAIRALIG LQAREARVMR
AGGIEDVSID ALAVGDIIVL RPGERVPMDG AVTQGTSFVD EAMITGEPVP VEKTTGCAVT
GGTVNGAGSL HLRATRVGAD TTLAQIIRMV QEAQGAKLPI QALVDRVTLY FVPAVMVVAA
VTVLAWLIFG PEPVVTYALV AGVSVLIIAC PCAMGLATPT SIMVGTGRAA ELGVLFRKGD
ALQGLAGVRV VALDKTGTVT EGRPEVVDVA LADGFTRDDV MTLAGAAEAA SEHPIASAIV
RAARSEAVAS DIEVALGRGL RANVEGRAVA IGSARFLRDE GIDCTGFNEA VHTARGETVV
FVAVDGALAA MIAVADTVKP SSAAAIQALK QKGLRVAMIT GDTRATARAI ADRLGIDEVV
AEVLPDGKVD ALATLRAHGP VAFVGDGIND APALAHADVG IAIGTGTDVA IESADVVLMS
GDLAGVATAI EVSTTTMANI RQNLGWAFAY NTGLIPLAAG ALYPVTGLLL SPAFAAGAMA
LSSVSVLGNA LRLRRMGRRQ GQVS
|
|---|
| |