Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2044 |
Symbol | |
ID | 3934497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2048283 |
End bp | 2049179 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637904400 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_509986 |
Protein GI | 89054535 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.193699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.806351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACT GGCTTCTGGA CGACAGCCCG TCGTCGCGCA CCCAAGCCGC ATCGGGGCGG GCGTATCGCA TCACGCTGGA CCTGCTGCGC AACCCCCTGA CCGTGGCGGG TGCGCTGATC ATCGCCGCAT TGATCCTGAC GGCGATCTTC GCGGATGCCA TCGCGCCGGG CGGACCGGGC GGCCAGTTCC TGGAGCGCCG CCTGCAACCG CCATCGTCTG AATTCTGGTT CGGCACCGAT CAATTGGGCC GCGATATCTT TTCCCGTGTG GTCCACGGCG CACAGATCAC GTTGCAGATC GTGGCTTTGG TGGCCGTCAT ATCCGCCCCC CTCGGCCTGT TGATCGGGGC GATCTCCGGC TACTTTGGCG GCTGGATCGA CCGGACGCTG ATGGGGGTGA CGGATGTGTT CCTGTCGATG CCGAAGCTGG TCCTGGCGCT GGCCTTCGCC GCCGCTCTTG GACCGGGGAT CGACAATGCG ATCATCGCCA TTGCCATCAC CACATGGCCC GCCTATGCCC GCATCGCACG GGCCGAAACG CTGACGCTGC GCAGGTCCGA ATTCGTCGCT GCCGCGCGGC TCTTGGGGGC GTCGCATACG CGCGTCATCA CCCGCCACAT CCTGCCACTC TGCACATCGT CGATGATCAT CCGCGTCACG CTGGACATGG CGGGGATCAT CCTGACGGCC GCCGGGCTTG GCTTTCTGGG CCTTGGCGCA CAACCGCCCG AACCGGAATG GGGCGCGATG ATCTCGGGCG GGCGGTCATT CATCTATGAC CAATGGTGGG TCTCCACCTT CCCCGGTTTT GCCATCATCC TCGTGTCGCT GGGGTTCTGT TTTCTCGGCG ACGGGGTGCG CGATGTGCTG GACCCGAAAT CGGAGCGCAA GGGATGA
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Protein sequence | MRDWLLDDSP SSRTQAASGR AYRITLDLLR NPLTVAGALI IAALILTAIF ADAIAPGGPG GQFLERRLQP PSSEFWFGTD QLGRDIFSRV VHGAQITLQI VALVAVISAP LGLLIGAISG YFGGWIDRTL MGVTDVFLSM PKLVLALAFA AALGPGIDNA IIAIAITTWP AYARIARAET LTLRRSEFVA AARLLGASHT RVITRHILPL CTSSMIIRVT LDMAGIILTA AGLGFLGLGA QPPEPEWGAM ISGGRSFIYD QWWVSTFPGF AIILVSLGFC FLGDGVRDVL DPKSERKG
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