Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2026 |
Symbol | |
ID | 3934479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2031829 |
End bp | 2032293 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904382 |
Product | invasion associated locus B |
Protein accession | YP_509968 |
Protein GI | 89054517 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.201863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTGCC TTCTGGCGCT GGTCCTCTGT CACATTGCCC CTGCCGCCGC GCAATCGCCG GACCAGTCCA CCGTGTTCGG CGATTGGGAG CGGGTTTGCT CCACCGATGG GGCCTGCGTG TTCTCGCAGG CCAACGCCGA TGCAGACACC AACGACATCC GCATGCGCAC CGAGATTTCC CGGGTGTCGG ACACGCAGAT CCTGATGTCG GTCGTGGTGC CCGACAGCGT GCTGCTGACC GAGGGGCCGT GGTTGACCAT CGATGGCATC TACGTGGGTG AGTTGAACTA CGTCCAATGC CCCGGCGGAT GCCTGGCCCG CATCCTGTTC ACCGACCAGC AGTTCCGGCT TGTGTCCGGC GGCACGCGCG GCGTCATCAC GGTGACGGCT GGCGGCCAAC GCGTGGGGCT TGTCGTCTCC ATGGACGGGC TGCAGGACGG CCTCGCGTCG CTCGACGATC TGTGA
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Protein sequence | MPCLLALVLC HIAPAAAQSP DQSTVFGDWE RVCSTDGACV FSQANADADT NDIRMRTEIS RVSDTQILMS VVVPDSVLLT EGPWLTIDGI YVGELNYVQC PGGCLARILF TDQQFRLVSG GTRGVITVTA GGQRVGLVVS MDGLQDGLAS LDDL
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