Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2020 |
Symbol | |
ID | 3934473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2023540 |
End bp | 2024154 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637904376 |
Product | (Acyl-carrier protein) phosphodiesterase |
Protein accession | YP_509962 |
Protein GI | 89054511 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.818794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0710371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC TTCTTGTTGT CGAAACCAGC CCGCGCGGGG CGGCCTCGAT CTCTCGGAAC ATAACCAAGA CATTCGTCGC CAAATGGAAA GCCGCCCATG CCGATAGCGC AGTCGTTCAG CGCGATCTGA CCGGAACCGG TTTGGAGTTC GTCACAGCCC CGTGGCTTGA AGCCTACTTC ACGCCACCGG ATCAACATAC CGATGCGATG AAGCAGGCAC TGGCCCTGTC GGACGAACTG GTCGCCGAGT TGCTGAACGC CGATGAGCTC GTTATCGGTA CGCCGGTCTA TAATTACAAC GTGCCGGCCC TGCTGAAGGC GTGGATTGAT CACATTGTCC GCAAGGGCAT CACACTGGGC ATGGATGGAA AAGGTCTTCT CACCGGCAAG AAGGCGACTG TGCTGATCGC GTCGGGCGGC ATTTACTCTG AAGGGTCCCC CATCGCGGAT CGCGCGATCG CTCCGCAGTA TCTCAAACTG ATCCTGGGCG TGATCGGAAT CGAGAACGTT ACAATCGTTG CAGGCGGCGG GGCCAAAGCT GTCGACATGG GCGAAGCGAC GATGGATGGC TTTATCGCAA CCCTTGACAG CGAATTGACA GCGGCAGCGC AATGA
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Protein sequence | MPKLLVVETS PRGAASISRN ITKTFVAKWK AAHADSAVVQ RDLTGTGLEF VTAPWLEAYF TPPDQHTDAM KQALALSDEL VAELLNADEL VIGTPVYNYN VPALLKAWID HIVRKGITLG MDGKGLLTGK KATVLIASGG IYSEGSPIAD RAIAPQYLKL ILGVIGIENV TIVAGGGAKA VDMGEATMDG FIATLDSELT AAAQ
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