Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1980 |
Symbol | |
ID | 3934432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1975655 |
End bp | 1976836 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904335 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_509922 |
Protein GI | 89054471 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.307298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCCCA AGCGCCCCGG CTCAGACGGC CCGTTCCCCA GACCCGTCGC ACCTGTGGCC CCCAAGGGCG AGCCCGGTGG TGTCCCGCCT GTTGAACGCC GCCCGCCGCA CAGAAAAGAC CCGAGCGCTG GTCCGGATCC AGACGATCTT TATGCCGCGC TCGATCTGGG TACGAATTCG TGCCGTATGC TGATTGCGCA GCCCAAGGGC AGCCAGCTTC ATGTGGTGGA TTCCTTCTCG AAGTCCGTGC AGCTGGGCCA GGGTTTGGAA GCCTCAGGCC GGATGAGCCG CGCGTCGATG GCGCGCGCTG TGGGGGCGCT GAAGATCTGT CAGAAAAAAC TGAGCAAGCA CCGTGTGGAG CGGGCGCGCC TTGTGGCCAC GGAAGCCTGC CGCCGTGCGA CCAATGCGGG GGAATTCATC TCTCTGGTCA AGCGGGAGAC CGGGCTGGAG CTGGAGATCA TCAAGCCGGA GGAAGAGGCG CAGCTGGCCG TTGTGTCCTG CGCGCCGCTG GTCTCCACCC GGACCGAGCA GCTATTGGTG GTGGACATCG GCGGCGGGTC CACGGAACTG GTGTGGATCG ACCTGTCCCG CGTACCCAAG CTGGAACGCC CCAAGGCGAT CATGCGCCTG CATCAGGGGT TTGACTACGA CGACAGCATT TTCCCGCGTG CGAAGGTGGT GGACTGGATC TCCATCCCGT TGGGCGTCGC GACCCTGAAG GATATGTATG ACGATGTCGC CGATGACGGC GCGCGGTTCG CGCTGATGTC GTGGTTTTTC GAGGAGCAAT TGGCCGAGTT CTCCCCATAC ACCGATGCGG CGGAACAAAC GCTGGAGGGG TTCCAGATCA TCGGCACCAG TGGAACAGTC ACCACGGTGG CCGCGTCGCA TCTGGGCCTG CGCCGCTATG ATCGGAACAA GGTGGACGGC TTGCGGATGA CCTCGACCCA GATCGACACG GTGATCAACG GATACCTGGC CCTGGGCCCC GACGGGCGTC GCCGTGACCC AAGGATTGGG CGGGACCGGC AGACGCTGAT CATGTCGGGT GCTGCGATTT TGCAGGCGCT GTTGCGCGCC TGGCCGACCG ACAGGCTGAG CGTCGCGGAT CGGGGGCTTC GGGAGGGGCT TTTGTATGCG CAGATGAGCC GTGACGGGGT TCTGGAGGAT GGTCCGTACT GA
|
Protein sequence | MSPKRPGSDG PFPRPVAPVA PKGEPGGVPP VERRPPHRKD PSAGPDPDDL YAALDLGTNS CRMLIAQPKG SQLHVVDSFS KSVQLGQGLE ASGRMSRASM ARAVGALKIC QKKLSKHRVE RARLVATEAC RRATNAGEFI SLVKRETGLE LEIIKPEEEA QLAVVSCAPL VSTRTEQLLV VDIGGGSTEL VWIDLSRVPK LERPKAIMRL HQGFDYDDSI FPRAKVVDWI SIPLGVATLK DMYDDVADDG ARFALMSWFF EEQLAEFSPY TDAAEQTLEG FQIIGTSGTV TTVAASHLGL RRYDRNKVDG LRMTSTQIDT VINGYLALGP DGRRRDPRIG RDRQTLIMSG AAILQALLRA WPTDRLSVAD RGLREGLLYA QMSRDGVLED GPY
|
| |