Gene Jann_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1980 
Symbol 
ID3934432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1975655 
End bp1976836 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID637904335 
ProductPpx/GppA phosphatase 
Protein accessionYP_509922 
Protein GI89054471 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.307298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCA AGCGCCCCGG CTCAGACGGC CCGTTCCCCA GACCCGTCGC ACCTGTGGCC 
CCCAAGGGCG AGCCCGGTGG TGTCCCGCCT GTTGAACGCC GCCCGCCGCA CAGAAAAGAC
CCGAGCGCTG GTCCGGATCC AGACGATCTT TATGCCGCGC TCGATCTGGG TACGAATTCG
TGCCGTATGC TGATTGCGCA GCCCAAGGGC AGCCAGCTTC ATGTGGTGGA TTCCTTCTCG
AAGTCCGTGC AGCTGGGCCA GGGTTTGGAA GCCTCAGGCC GGATGAGCCG CGCGTCGATG
GCGCGCGCTG TGGGGGCGCT GAAGATCTGT CAGAAAAAAC TGAGCAAGCA CCGTGTGGAG
CGGGCGCGCC TTGTGGCCAC GGAAGCCTGC CGCCGTGCGA CCAATGCGGG GGAATTCATC
TCTCTGGTCA AGCGGGAGAC CGGGCTGGAG CTGGAGATCA TCAAGCCGGA GGAAGAGGCG
CAGCTGGCCG TTGTGTCCTG CGCGCCGCTG GTCTCCACCC GGACCGAGCA GCTATTGGTG
GTGGACATCG GCGGCGGGTC CACGGAACTG GTGTGGATCG ACCTGTCCCG CGTACCCAAG
CTGGAACGCC CCAAGGCGAT CATGCGCCTG CATCAGGGGT TTGACTACGA CGACAGCATT
TTCCCGCGTG CGAAGGTGGT GGACTGGATC TCCATCCCGT TGGGCGTCGC GACCCTGAAG
GATATGTATG ACGATGTCGC CGATGACGGC GCGCGGTTCG CGCTGATGTC GTGGTTTTTC
GAGGAGCAAT TGGCCGAGTT CTCCCCATAC ACCGATGCGG CGGAACAAAC GCTGGAGGGG
TTCCAGATCA TCGGCACCAG TGGAACAGTC ACCACGGTGG CCGCGTCGCA TCTGGGCCTG
CGCCGCTATG ATCGGAACAA GGTGGACGGC TTGCGGATGA CCTCGACCCA GATCGACACG
GTGATCAACG GATACCTGGC CCTGGGCCCC GACGGGCGTC GCCGTGACCC AAGGATTGGG
CGGGACCGGC AGACGCTGAT CATGTCGGGT GCTGCGATTT TGCAGGCGCT GTTGCGCGCC
TGGCCGACCG ACAGGCTGAG CGTCGCGGAT CGGGGGCTTC GGGAGGGGCT TTTGTATGCG
CAGATGAGCC GTGACGGGGT TCTGGAGGAT GGTCCGTACT GA
 
Protein sequence
MSPKRPGSDG PFPRPVAPVA PKGEPGGVPP VERRPPHRKD PSAGPDPDDL YAALDLGTNS 
CRMLIAQPKG SQLHVVDSFS KSVQLGQGLE ASGRMSRASM ARAVGALKIC QKKLSKHRVE
RARLVATEAC RRATNAGEFI SLVKRETGLE LEIIKPEEEA QLAVVSCAPL VSTRTEQLLV
VDIGGGSTEL VWIDLSRVPK LERPKAIMRL HQGFDYDDSI FPRAKVVDWI SIPLGVATLK
DMYDDVADDG ARFALMSWFF EEQLAEFSPY TDAAEQTLEG FQIIGTSGTV TTVAASHLGL
RRYDRNKVDG LRMTSTQIDT VINGYLALGP DGRRRDPRIG RDRQTLIMSG AAILQALLRA
WPTDRLSVAD RGLREGLLYA QMSRDGVLED GPY