Gene Jann_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1977 
Symbol 
ID3934429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1971718 
End bp1973862 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content63% 
IMG OID637904332 
Producthypothetical protein 
Protein accessionYP_509919 
Protein GI89054468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.574809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATA GACAAAATCT GGCCGAACAC GGCGCAGGCC TTTGCGTTTG GGCGCTTGCG 
GGGCTTGGCG TCACGGCAAA TTTGACCGGG GCCGCCAGCC TAGCGGTCGT GGGCTTCATC
GCCTTCAGCG CCTTCAAGAA ATACCGCAAA GACCGCTGCG TTTCTGCCGC CGAGCGCGCG
GCCAAAGCCC TTACACCGCA ACACGGGATG CCGGAACGCG GGATCAACGC CGCGCTGCGA
CTGATCAAAG ACCTGCCCAA ACCCGTTGCG ATCGACCCCA AAGACCTCAA GGACGCCCTT
AAACGCAACG ACTTCCCCAA CACGCTTTAT GACCACCTGT TCGGCAACAC CTACGTCCCC
AAGGACGACG GCGTGGAAAA GGCGCTCCGC ATCGTCATTG CAGAAACCTA CGAGGTCCTG
CGGCTGGAAG ACGACATCCA CAAGCTGTTC ACGCAGGAAT CCCTGAAAGA ACTCGAACGC
CTTGCGGCAC TTTCGGCAGA GAATGACGCC GCGTTCCAAA AGGCGCTGGC GGAGTTGAGC
GAGGGGCAAG AGGTGATCGC AGGGGCCGCG CTCCACACAA TGGACCGTAT CGACGAGGTT
GCTGATCGGC TTCTCGCAGA GACCGCCGAA TTGCGCGGAA AACTCCACAG TGCCGAAAAA
TTCGCCGCGG CGCTGGCCTA TAAATACGCC GAGGACTTCC CCGATGACCT TGACGCCGCC
CTGAAGACCC TCGCTTCCGC GCTGGAGACC GCTGCCAAAG CCAGCGCGCG AAACGCCCTG
CCCTCCAACC TCAGCGAAGC GGTGGACACC ATCGTGGCAG ATGTGGAGCG CCTGAAACAA
GACGGCCAGA TCGAAGAAGC CTACGACAAG GCACAAGCCG AACGCGCCCG CCGCAAAGAG
GCGCGGGAGA GGCAGATCGC GGAAGACAGC CGCGTGCTGG ACCTCGTGAT CGAACACGCA
ACCTACGCGC AGGATGAGAC AGGATACGCC GAGGCAACAC TGGAGCAAAT CCAACTCGAC
AGCCCCAGCG CGGAAGACAC GTTCAAGCGC CTCCGCGCCC TCCGACGCGA ACGCTACCAA
GAGGGCCTCC GCCTCGGCAC GCCCTTCGCG CTGACCGCCG CCGCAGGCCT CGCCCGCACC
TGCATTGAGA TCGCCCCAAC ACCCTACCTG CGCGCAATGG CACAAAACGA CCTCGGTGAA
GCGCTGCGAA ACCAAGGCAG CCGCACCCAC GGCGCAGAGG GCAATGCCCT GCTGGCAGAG
GCCGTGGACT GCTATCGCTC CGCGCTGCGG GTCCGCACAG AGGACGACCA TCCCTTGGAT
TGGGCAATGA CCATGCAAAA CCTCGCCAAT GCGCTGCAAA CGCAAGGTGA CCGCACCGAA
GACCCCGAGG GCAACGCCCT GCTTGAGGAT GCCGTGGACA GCTATCGCGC CGCCCTCCGC
GTCCGCACCG AGGATAACCA CCCCTTGGAT TGGGCCGGGA CCATGCAAAA CCTCGCCAAT
ACACGGGCAT TGCAAGGCAT CCGCATCCAA GGGCCCGAGG GTAACCCCCT GCTGGCAGAG
GCCATTGACA GCTACCGTGC CGCCCTCCGC GTCTGCACCG AGGCCGACCA CCCTGTGGAC
TGGGCCATGA CCCTGCAAAA CCTCGCCAAT ACGCTGCAAA TCCAAGGCAC GCGCACCCAA
GGCCCCGAGG GCAATGCCCT GCTGGCAGAG GCTGTCGACA GCTACCGCGC CGCGCTGCGA
GTCCGTACTG AGGATGACCA CCCCGTAGAC TGGGCCATGA CCCTGCAAAA CCTCGCCAAT
ACGCTGCAAA TCCAAGGCAA CCGCACCAAA GGCCCCGAGG GCATAGCCCT GCTGGCAGAG
GCCGTGGATA ACTACAATGC CGCACTTCGG GTCCGCACGG AGGCAGACCA CCCGGTGCAA
TGGGCCATGA CCAAAGAAAA CCTCGCCCAC GCCGAACTCG CCCGCGCCGA ACATGACACT
ACCACCGACC TGCGCCCGCA TCTACAGGCC GCCCTCACCC ACGTCGACAA CGCCCTGCGC
ATCTTCGACC CTGTCCACAT GTCCTACAAC CACGCCAAGG CCACCGCCCT CCGCGATGAC
ATCCTCAAAG CGCTCGACGC CCCACCCCCC TCATCATCTT CATGA
 
Protein sequence
MNNRQNLAEH GAGLCVWALA GLGVTANLTG AASLAVVGFI AFSAFKKYRK DRCVSAAERA 
AKALTPQHGM PERGINAALR LIKDLPKPVA IDPKDLKDAL KRNDFPNTLY DHLFGNTYVP
KDDGVEKALR IVIAETYEVL RLEDDIHKLF TQESLKELER LAALSAENDA AFQKALAELS
EGQEVIAGAA LHTMDRIDEV ADRLLAETAE LRGKLHSAEK FAAALAYKYA EDFPDDLDAA
LKTLASALET AAKASARNAL PSNLSEAVDT IVADVERLKQ DGQIEEAYDK AQAERARRKE
ARERQIAEDS RVLDLVIEHA TYAQDETGYA EATLEQIQLD SPSAEDTFKR LRALRRERYQ
EGLRLGTPFA LTAAAGLART CIEIAPTPYL RAMAQNDLGE ALRNQGSRTH GAEGNALLAE
AVDCYRSALR VRTEDDHPLD WAMTMQNLAN ALQTQGDRTE DPEGNALLED AVDSYRAALR
VRTEDNHPLD WAGTMQNLAN TRALQGIRIQ GPEGNPLLAE AIDSYRAALR VCTEADHPVD
WAMTLQNLAN TLQIQGTRTQ GPEGNALLAE AVDSYRAALR VRTEDDHPVD WAMTLQNLAN
TLQIQGNRTK GPEGIALLAE AVDNYNAALR VRTEADHPVQ WAMTKENLAH AELARAEHDT
TTDLRPHLQA ALTHVDNALR IFDPVHMSYN HAKATALRDD ILKALDAPPP SSSS