| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1973 |
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| Symbol | |
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| ID | 3934424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1966702 |
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| End bp | 1967343 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904327 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_509915 |
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| Protein GI | 89054464 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.662433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCA TCGTATTCGA CCTCGATGGC ACATTGATCG ACAGCGCACA GGATATCACG
TCTGCGGCCA ATGCCACCCT TGCGGAGGTG GACGCAGACC CCTTGAGCCT TGCGGAGGCG
CGCAGCTTTG TCGGGTCCGG TGCCGTGGTC TTCGTGGAGC GGATGGCCCG CGCGCGCGAT
CTGGCTGATC CCGAACCGCT CCTTCCCCGG TTTGTCCACC ACTATGAGCA CGCCGTCCAT
GACACAGTGA TCTACCCCGG CGTTGAGGCA GCATTGGCTG CATTAAAGGC CCACGGCCAC
CGTCTGGGTC TGTGCACCAA CAAGCCCGGC AGCCCGACCC GTGCAGTTCT GGCGCATCTG
GGGTGGGAGC GGCTGTTCGA GGTGGTCTTC ACCGGCGACA GTCTGCCCCA ACGCAAGCCC
GATCCGGCAC CGCTTTTGGC CGCGTTTGAT GCCTTGGGCG ATGGCCCGGC GATCTATGTG
GGCGACAGTG AGGTTGATGC CGAAACTGCG GAGCGCGCTG ATGTGCCGTT CGTGCTCTAC
ACGCCCGGCT ATCGAACGGC GCCTCTGGAC GACCTCGTTC ACGCGGCGGC CTTCGATGAT
TGGGCAAGGG TGCCGTGGAT CGTCGCGGAT CTGACCGGCT AA
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| Protein sequence | MARIVFDLDG TLIDSAQDIT SAANATLAEV DADPLSLAEA RSFVGSGAVV FVERMARARD
LADPEPLLPR FVHHYEHAVH DTVIYPGVEA ALAALKAHGH RLGLCTNKPG SPTRAVLAHL
GWERLFEVVF TGDSLPQRKP DPAPLLAAFD ALGDGPAIYV GDSEVDAETA ERADVPFVLY
TPGYRTAPLD DLVHAAAFDD WARVPWIVAD LTG
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