| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1945 |
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| Symbol | |
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| ID | 3934396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1935989 |
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| End bp | 1937023 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904299 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509887 |
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| Protein GI | 89054436 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA GGGAGTTGTC CGAATCTCTC GGGCTGAGCC AGACCACCGT CAGCCGCGCT
TTGAATGGCT ACCCCGAGGT GCGCGAAGCG ACGCGCCTGC GGGTGCAGAA GGCGGCAGAG
GCGGCGAACT ACCTGCCCAA CTCGCGGGCC CGCAGGCTGG CAACGGGCCG CGCCATGGCC
ATCGGTCATG TGATGCCGCT TAACGGGCGG GAGGAGTTGG TGAACCCGAT CTTTGCCGAT
TTCATCGCCG GTGCGGGGGA AGTCTATGGC AAGGACGGGT TCGACCTGCA CCTGTCGATG
GTCCCCGCAG ATTGCACCGA AGCCGCCTAC AGGCAGATGG CGGCCAATGC GTCGGTCGAT
GCGGTCATGG TGCAGGCGCC CACATTGGAT GATGCGCGCG TGCCGCTGCT GAAAGATCTC
GGGCTGCCCT TCCTGATCCA TGGCCGCACC GCGGATCCGC AGGGCTACAG CTGGCTCGAC
GTCGCCAACG TCCGCGCCTT CCGCCGCGCC ACCGATCTTC TGCTGGATCT GGGGCACCGA
CGGATCGCGC TTTTGAATGG ACAGGAGACG CTGGATTTCG CCCTGCGCCG TCGGCGCGGG
TTTGAAGAGG CCCTGACCGC CCGGGGCCTG ACCCCCCGTC CCGACTTCCT GCATTCGGAC
GTCATGACGG AGCAATACGG CTATCGCACG GCGCGCGCGC TGCTGGACCG CGATGACGCG
CCCACGGCCT TTGTCGTCTC GTCGATCATT CCGGCCATCG GCGTGCGTCG CGCCGCCGGA
GAGCGCGGGC TGCGCACCGG CCACGACATC TCGATCATCT GCCATGACGA CGTGCTGAGT
TATATCGACA ACGATGGCAT GAACGCCCCG GAAGGGCCGG CCTTTACTGC CACCCGCTCC
TCCATCCGTG CGGCGGGGCG GCGGTGCGCG GAGATCCTGC TCAGCCTCAT CGACGATCCC
GACCAGCCCC ATATTCAGGA GATCTGGGAG ACTGATCTTA CCCTCGGACG GTCCACGGGA
CCCGCTCCAA CCTAG
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| Protein sequence | MNLRELSESL GLSQTTVSRA LNGYPEVREA TRLRVQKAAE AANYLPNSRA RRLATGRAMA
IGHVMPLNGR EELVNPIFAD FIAGAGEVYG KDGFDLHLSM VPADCTEAAY RQMAANASVD
AVMVQAPTLD DARVPLLKDL GLPFLIHGRT ADPQGYSWLD VANVRAFRRA TDLLLDLGHR
RIALLNGQET LDFALRRRRG FEEALTARGL TPRPDFLHSD VMTEQYGYRT ARALLDRDDA
PTAFVVSSII PAIGVRRAAG ERGLRTGHDI SIICHDDVLS YIDNDGMNAP EGPAFTATRS
SIRAAGRRCA EILLSLIDDP DQPHIQEIWE TDLTLGRSTG PAPT
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