Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1913 |
Symbol | |
ID | 3934364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1902062 |
End bp | 1903561 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904267 |
Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
Protein accession | YP_509855 |
Protein GI | 89054404 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.815666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGA TCGGTCACTG GATTAACGGC AAGCACGTTG CAGGCACGTC TGGCCGCGCG CAGGACGTCT GGAACCCCGC CACCGGGGAG GTGCAGGCCA AGGTTGCGCT GGCGTCGAAG GCCGAGCTGG ACGATGCCGT GGCCGACGCC GCCAAAGCGC AGGTCAAATG GGCCGCGACC AACCCGCAGC GCCGGGCGCG GGTGATGATG GCCTTTGTCA GCCTGTTGCA CCGGGACATG GACAAGCTGG CCGAAGCGCT GTCGCGCGAG CATGGCAAGA CCATCCCTGA CGCCAAGGGT GATGTGCAGC GCGGCCTTGA AGTCGTGGAA TTCTGCATCG GCGCGCCGCA CCACCTGAAG GGCGAGTTCA CCGACGCCGC AGGCCCCGGC ATCGACATGT ATTCCATGCG CCAGCCCGTG GGTGTGGCCG CGGGCATCAC GCCGTTCAAC TTCCCCGCGA TGATCCCGCT TTGGAAGATG GCCCCGGCCC TTGTCTGCGG CAACGCGTTC ATCCTGAAGC CGTCCGAGCG CGATCCGTCC GTGCCGATGA TGCTCGCGGA ACTGATGCAG GAGGCGGGCC TGCCCGACGG CGTCTTGCAG GTGGTCAATG GCGATAAGGA GAGCGTGGAC GCGATCCTCG ACAATGAGAC CATCGCCGCC GTGGGCTTCG TCGGCTCCAC CCCCATCGCC GAATATATCT ACGGGCGCGG CTGTTCCAAC GGCAAGCGCG TGCAGTGTTT TGGCGGCGCA AAGAACCACA TGATCATCAT GCCCGACGCG GATATGGATC AGGCCGCGGA TGCGTTGGTC GGGGCCGGAT ACGGCGCGGC AGGCGAGCGG TGCATGGCGA TTTCCGTGGC CGTGCCTGTG GGCGAAGAGA CGGCGGACCG TCTGATCGAA AAGCTGGTGC CGAAGATCGA GGCGCTGAAG GTGGGGCCGT ACACGTCTGG CGATGATGTC GACTATGGTC CCGTCGTCAC CCCGATGGCC AAGGAGAACA TCCTGCGGCT GGTACAAACG GGTGTGGATC AGGGGGCGGA GCTGGTCGTG GACGGTCGCG ATTTCAGCCT GCAGGGATAT GAGGACGGCT TTTTCGTTGG CCCGCATCTG TTCGACCGCG TGACGCCGGA TATGGACATC TACAAGCAGG AGATCTTCGG ACCTGTGCTG TCGACCGTCC GCGCGGGGTC CTATGAGGAA GCCCTGAAAC TGGCGATGGA CAATGAATAC GGCAACGGCA CCGCGATCTT CACCCGCGAT GGCGACGCGG CGCGAGATTT TGCGTCCCGG ATCAATGTCG GCATGGTCGG CATCAACGTG CCGATCCCGG TGCCGCTGGC CTATCACACC TTCGGCGGCT GGAAGAAATC GGCGTTTGGC GACCTGAACC AGCACGGGCC CGATGCGTTC CGCTTTTACA CCAAGACCAA GACCGTCACC TCCCGCTGGC CCTCGGGCAT CAAGGAAGGT GGCGAGTTCA CAATCCCCGT GATGGAGTAG
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Protein sequence | MEQIGHWING KHVAGTSGRA QDVWNPATGE VQAKVALASK AELDDAVADA AKAQVKWAAT NPQRRARVMM AFVSLLHRDM DKLAEALSRE HGKTIPDAKG DVQRGLEVVE FCIGAPHHLK GEFTDAAGPG IDMYSMRQPV GVAAGITPFN FPAMIPLWKM APALVCGNAF ILKPSERDPS VPMMLAELMQ EAGLPDGVLQ VVNGDKESVD AILDNETIAA VGFVGSTPIA EYIYGRGCSN GKRVQCFGGA KNHMIIMPDA DMDQAADALV GAGYGAAGER CMAISVAVPV GEETADRLIE KLVPKIEALK VGPYTSGDDV DYGPVVTPMA KENILRLVQT GVDQGAELVV DGRDFSLQGY EDGFFVGPHL FDRVTPDMDI YKQEIFGPVL STVRAGSYEE ALKLAMDNEY GNGTAIFTRD GDAARDFASR INVGMVGINV PIPVPLAYHT FGGWKKSAFG DLNQHGPDAF RFYTKTKTVT SRWPSGIKEG GEFTIPVME
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