Gene Jann_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1909 
Symbol 
ID3934360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1897865 
End bp1899010 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID637904263 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_509851 
Protein GI89054400 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTC AGCTGAGCGA AGAGGCGCAG GCGATCTACG ACATGGCGCG CGCGTTTGGA 
GAGGCCGAGA TTGCGCCCCA TGCCCGTGAT TGGGAACGCG ACGGCACAAT CCCCAAGGCG
CTTTGGCCGA AGCTGGCCGA ATTGGGCTTT GCCGGGCTCT ATGTGTCCGA GGAAAACGGA
GGCTCAGGTC TGTCGCGGCT GGAGGCGACG CTGGTGTTTG AAGCGCTGTC GGAGGCCTGT
GCGTCGGTCG CCGCCTTCCT GTCGATCCAC AATATGTGCG CGAAGATGAT TGAGACCTTC
GGCTCCGACG AGATGCGCGC GACGTTTCTG CCCCGCGCGT TGTCGATGGA AACCGTGTTC
TCCTACTGCC TGACGGAGCC GGGATCCGGC TCGGACGCGG CGGCGTTGAA GACGCGGGCG
GAGCGCACGA ACGAAGGCTA TGCGCTGACC GGCACCAAGG CGTTCATCTC GGGCGGTGGC
TATTCGGACG CCTATATCGT GATGTGCCGC ACCGGAGAGG ACGGGCCGCG TGGGATCTCG
GCCGTGGTCG TGGAAGACGG CGCGGATGGC CTGTCGTTCG GCGGGCTGGA GGACAAGATG
GGATGGCGGT CGCAACCCAC CCGCGCGGTT CAATTGGACG ACTGTGCGGT CCCGGCGGCG
AACCTTTTGG GCGAAGAAGG CCACGGGTTC CGCTATGCCA TGGCGGGGTT GGATGGGGGG
CGGTTGAACA TTGCGGCTTG TTCTTTGGGT GCGGCGGCGG CGGCCTTGCG GGGGACTTTG
GCCTACATGG GCGAGCGGCA GGCGTTCGGG CAGTCGATCG ACCAGTTCCA GGCATTGCAG
TTCCGGCTGG CGGACATGGA GATCGAGTTG GAGGCGGCGA AGATCTTCCT GCGACAGGCC
GCCTGGAAAC TCGACACCGG CGCGTCGGAT GCGACCAAGG CCTGCGCCAT GGCCAAGAAG
TTCTGTACCG AGGCCGGGTC ACGGATTGCC GATCAATGCC TGCAACTCCA CGGCGGCTAT
GGCTATCTGG CGGATTACGG GATCGAGAAG ATCGTGCGCG ACTTGCGGGT ACATCAGATC
CTGGAAGGCA CCAATGAAAT CATGCGGATG ATCGTGTCGC GGCAGATGCT GGCGGATCGC
GGGTGA
 
Protein sequence
MDFQLSEEAQ AIYDMARAFG EAEIAPHARD WERDGTIPKA LWPKLAELGF AGLYVSEENG 
GSGLSRLEAT LVFEALSEAC ASVAAFLSIH NMCAKMIETF GSDEMRATFL PRALSMETVF
SYCLTEPGSG SDAAALKTRA ERTNEGYALT GTKAFISGGG YSDAYIVMCR TGEDGPRGIS
AVVVEDGADG LSFGGLEDKM GWRSQPTRAV QLDDCAVPAA NLLGEEGHGF RYAMAGLDGG
RLNIAACSLG AAAAALRGTL AYMGERQAFG QSIDQFQALQ FRLADMEIEL EAAKIFLRQA
AWKLDTGASD ATKACAMAKK FCTEAGSRIA DQCLQLHGGY GYLADYGIEK IVRDLRVHQI
LEGTNEIMRM IVSRQMLADR G