Gene Jann_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1852 
Symbol 
ID3934303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1838937 
End bp1840139 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content61% 
IMG OID637904206 
Producttoxic anion resistance 
Protein accessionYP_509794 
Protein GI89054343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3853] Uncharacterized protein involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.263274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0294888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG AGACACACCA AAAGGCCCAA GAGGTCGAAA CGATGGTTGA AGAACTGAAC 
GCAATCGTTT TGCCGGAACC CGCCGCGGAC CTGATCCCCC TGCCCGAAGC CGACGAACCG
ACGGCCGCGC AAATCCGCCT GCGCGTTGCA GAGATCGACA TGACCGACAC GAACTCCATC
GTGTCCTTTG GCTCCTCCGC CCAGGCCGAG TTGCAGCAGA TCTCTCAGGC GATGCTGGCC
GGTGTGAAGA ACAAGGATGC TGGCCCTGCG GGCGACAGCT TGCGCGAAAT CGTGGGTACG
ATCCGCGGCT TCTCCGTCGA TGAGCTGGAT CCCAACCGCA AGCAATCCTG GTGGGAGCGT
CTGTTCGGCA AGGCCAAGCC GATCCATGAT TTCATGGCGA AATACGAGGA TGTTCAGGAA
CAGATCGACA AGATCACCGA CAATCTGTTG CAGCACGAAC ATGTGCTGAT GAAGGACATC
AAATCCCTCG ACAAGTTGTA TGAGAAGACG CTGGATTTCT ACGACGAACT GGCGCTCTAC
ATCGCTGCCG GCGAGGAAAA GCTGAGAGAC CTCGATGAGA ACGTGATCCC CGCGAAGGAG
GCCGAAGTTC AGGCCGCGCC CGAGGATGAT CAGGTGATCA AGGCCCAGGA GCTGCGCGAT
ATCCGCGCCG CCCGTGACGA TCTGGAACGC CGGGTCCACG ACCTGAAGCT GACCCGCCAG
GTGACGATGC AGTCCCTGCC GTCGATCCGG CTGGTGCAGG AAAACGACAA ATCACTGGTC
ACCAAGATCA ACTCCACCCT CGTGAACACC GTGCCGCTGT GGGAAACGCA GCTGGCGCAG
GCGGTGACGA TCCAACGCTC CACCGAAGCC GCGAAGGCCG TGAAAGAGGC CACCGATCTG
ACCAACGAGC TGCTGACCCG TAACGCCGAG AACCTGCGCG AGAGCAACCG TCTGGTCCGC
AATGAGATGG AGCGCGGTGT CTTCGACATT GAAGCCGTCA AGCACGCCAA CGCCGAGCTG
GTCGCCACGA TCAACGAGAG CCTGGAGATT GCGGATGAGG GCAAACGCAA GCGCCGCGAA
GCCGAAGCGG AGATGGAGAA GATGGAGCGC GAGCTGCGCG ACACGCTGTC CTCGGCCTCG
GCCAGGCGTC CGGTGGCCGA TGCCGATGTC ATCGAGGGCA CTGCCACGCC CGCGCAGTCG
TAA
 
Protein sequence
METETHQKAQ EVETMVEELN AIVLPEPAAD LIPLPEADEP TAAQIRLRVA EIDMTDTNSI 
VSFGSSAQAE LQQISQAMLA GVKNKDAGPA GDSLREIVGT IRGFSVDELD PNRKQSWWER
LFGKAKPIHD FMAKYEDVQE QIDKITDNLL QHEHVLMKDI KSLDKLYEKT LDFYDELALY
IAAGEEKLRD LDENVIPAKE AEVQAAPEDD QVIKAQELRD IRAARDDLER RVHDLKLTRQ
VTMQSLPSIR LVQENDKSLV TKINSTLVNT VPLWETQLAQ AVTIQRSTEA AKAVKEATDL
TNELLTRNAE NLRESNRLVR NEMERGVFDI EAVKHANAEL VATINESLEI ADEGKRKRRE
AEAEMEKMER ELRDTLSSAS ARRPVADADV IEGTATPAQS