| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1850 |
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| Symbol | |
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| ID | 3934301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1836588 |
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| End bp | 1837697 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637904204 |
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| Product | hypothetical protein |
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| Protein accession | YP_509792 |
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| Protein GI | 89054341 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.129812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0309289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTA TGGATTTTCT CAAAGGTCAA TTTATTGACG TCATCGAATG GACCGATGAT
AGCCGGGACA CGATGGTCTA TCGCTTCGAG CGCTATGGCC ATGAAATCAA GTACGGTGCC
AAGCTGACGG TGCGCGAAGG CCAGGTTGCG GTCTTCATCC ACGAAGGCCA GCTGGCCGAC
GTCTTCACCC CCGGTCTCTA TATGCTCGAG ACCAACAACA TGCCGATCAT GACGTCCCTT
CAGCATTGGG ACCATGGCTT CAGCTCTCCG TTCAAGTCCG AGATCTACTT CGTGAACACG
TCGCGGTTCA CGGACCTCAA GTGGGGCACG AAAAACCCCA TCATGATCCG CGACAGCGAT
TTCGGCCCCA CGCGCATCCG CGCCTTTGGC ACCTACACCG TGAAGGTGAA GGATGCGGGC
CTGTTCATGA CGGAAATCGT GGGCACGGAC GGCGAGTTCA CCACCGACGA GGTGACGCAC
CAGATCCGCA ACATAATCGT GCAGCAGTTC AGCCAGGCCG TCGCGGGCTC GGGCATTCCG
GTCCTTGATA TGGCGGCGAA TACCGGCCAG ATGGGCGAGG TCGTGGCCGA GAAGATCTCT
GCCACTATCG GCTCCTACGG TCTGACCTTG CCGGAGCTGT ATATCGAAAA CATCTCCCTG
CCGCCCGCGG TGGAAGAGGC GTTGGATAAG CGGACATCCA TGGGTGTTGT GGGTGACCTG
AACAAATACA CCCAGTTCCA GACGGCAGAG GCGATGCGCG CGGCCGCCGA AAACCCCGGC
GGCGGTGGCG GCATGGGCGA AGGTCTTGGC ATGGGTATGG GTATGGCGAT GGCCAACCAG
ATGGCCAATA ACATGCATCA ACCGCACCAG GCCGCGCACG CAGCCCCTCC GCCGCCCCCG
GTGGAGCATG TCTGGCACAC GGCCGAGAAC GGGGCCACGA AAGGCCCGTT CTCCAAGGCG
TCGCTCGGTC AGATGGCAAA CGACGGCTCC CTCACCCGTG ATACGATGGT CTGGACCGCA
GGCCAGGACG GTTGGAAAAA GGCCGGTGAT GTGGATGAGC TGGCGCAGCT GTTTACCGTC
ATGCCGCCCC CTCCACCGCC GCCGATGTAA
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| Protein sequence | MAIMDFLKGQ FIDVIEWTDD SRDTMVYRFE RYGHEIKYGA KLTVREGQVA VFIHEGQLAD
VFTPGLYMLE TNNMPIMTSL QHWDHGFSSP FKSEIYFVNT SRFTDLKWGT KNPIMIRDSD
FGPTRIRAFG TYTVKVKDAG LFMTEIVGTD GEFTTDEVTH QIRNIIVQQF SQAVAGSGIP
VLDMAANTGQ MGEVVAEKIS ATIGSYGLTL PELYIENISL PPAVEEALDK RTSMGVVGDL
NKYTQFQTAE AMRAAAENPG GGGGMGEGLG MGMGMAMANQ MANNMHQPHQ AAHAAPPPPP
VEHVWHTAEN GATKGPFSKA SLGQMANDGS LTRDTMVWTA GQDGWKKAGD VDELAQLFTV
MPPPPPPPM
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