| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1838 |
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| Symbol | |
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| ID | 3934289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1823833 |
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| End bp | 1824993 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904192 |
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| Product | ribonuclease D |
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| Protein accession | YP_509780 |
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| Protein GI | 89054329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.529278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0732716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCACA CAATCACCAC CACCGATGAG CTGGCCGCCT ATTGCGCCCG CGCCGCAACC
CAACCTTATG TCACGGTCGA CACGGAATTC CTGCGCGAAC GCACCTATTT TGCGCAGCTC
TGCCTGGTGC AGGTGGCCAT GCCCGGCACC GATGACACGG ACGCGGTCCT GATCGATCCC
CTGGCCGAAG GGCTTTCGCT GGAACCGCTT TACGAGCTGT TCCGAAACGT TAATGTCGTT
AAGGTTTTTC ACGCCGCGCG CCAGGATCTG GAAATTTTCT TCGTTGAAGG CGGCCTCGTG
CCCACGCCCT TGTTCGATAC GCAAGTGGCC GCGATGGTCT GTGGTTTCGG GGATCAGGTC
GGGTACGAGA CGCTGGTGCG CCGGATTGCG AAGGCCAATC TGGACAAATC CTCTCGCTTT
ACCGACTGGT CGCGCAGGCC GTTGTCGGAT GCGCAAAAGG TCTACGCGCT GGCCGATGTG
ACCTATTTGC GCGAGATCTA CGAGTATCTC TCGGCGGAGT TGGCGCGGAC CGATCGCACC
CATTGGCTGG AAGAGGAATT GGCTCAACTA ACCAATGCCG ACGCCTATGT TGTTGATCCT
GAGAATGCGT GGAAGCGTTT GAAGTTGCGA TCCAATTCAG GGCGTGTCGT GGCGATTGCA
CAGCAGCTTG CGGCCTTCCG CGAAACCTAT GCCCAGGAAA AGAACGTGCC CCGCAACCGG
GTGCTGAAAG ACGATGCACT GTTGGAGTTG GCCGGAACCA AGCCCAAGAC CGTGGCCGAT
CTTGGCAAGT CGCGTCTTTT GTTGCGCGAT GCCCGCAAAG GCGCGATTGC CGAGGGGCTT
GTGGCCGCTG TCGCGCGCGG CATGTCGGTG CCCAACAGCG AAATCCCCAA GGTGCAAGCG
GGCCGCGACC GGTCCAACCT GAACCCGGCC CTGGCCGATC TGTTGCGGGT TCTGTTGAAG
GCCAAGGCCG AAAACGCCGG TGTTGCGACG AAGTTGATCG CGTCCTCCAG CGATCTTGAC
GACATCGCGT CGGGGTTCAC GGATGGGGTC TGGGCCTCAG GCTGGCGCAG TGAAGTCTTC
GGCGCGGATG CGCTTCGGCT TTTGAACGGA GAGGTCGCCC TTGCGGCCAA GGGCCAGAAA
GTCAAGATCG TCGAGGTTTA G
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| Protein sequence | MPHTITTTDE LAAYCARAAT QPYVTVDTEF LRERTYFAQL CLVQVAMPGT DDTDAVLIDP
LAEGLSLEPL YELFRNVNVV KVFHAARQDL EIFFVEGGLV PTPLFDTQVA AMVCGFGDQV
GYETLVRRIA KANLDKSSRF TDWSRRPLSD AQKVYALADV TYLREIYEYL SAELARTDRT
HWLEEELAQL TNADAYVVDP ENAWKRLKLR SNSGRVVAIA QQLAAFRETY AQEKNVPRNR
VLKDDALLEL AGTKPKTVAD LGKSRLLLRD ARKGAIAEGL VAAVARGMSV PNSEIPKVQA
GRDRSNLNPA LADLLRVLLK AKAENAGVAT KLIASSSDLD DIASGFTDGV WASGWRSEVF
GADALRLLNG EVALAAKGQK VKIVEV
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