Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1810 |
Symbol | pdxA |
ID | 3934259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1798449 |
End bp | 1799432 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904162 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_509752 |
Protein GI | 89054301 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.693301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.184814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCC TGCCCATTGC GCTCTCCGTC GGTGAGCCCG CGGGCATTGG CCCCGAGATT GCCGCCCGCG CCTGGGCCGC ATTGGGTGCG GAGATCCCGT TCTTCGTGAT CGGCGACCCG GCGCATCTGG CAGGCCATGG CGCGCCTCTG GTTAAGGTGG CCAAGGCATC CGAAGCCGTT GCTGCCTGCC GCGACGGCCT GCCCGTTTTG CCCCATAGCT TCGCCGAACC TGCAGTTCCC GGCCGACCCG ATCCGGCCAA CGCCCAGGGC GTGATCGACG TGATCGCGCG CGGCGTGGAT CTGGTGATGC GGGGGGAGGC TGCGGCGCTC ACCACCGGGC CGATCCACAA GAAGGCGCTG AAGGACGGCG CGGGCTTCGC CTTCCCGGGC CACACCGAAT ATCTGGCGCA TCTGGCTGGG GTAAGGCAGG TGGTGATGAT GCTCGCCTGC CCGGAGCTGC GTGTGGTGCC GGTGACGATC CACATCCCCG TCGCGGAGGT GCCCCGTTTG CTGACCGCAA AGTTGCTCCG CGATACCATT CGCATCACCG AGGCCGCGTT GCGGCAGGAT TTCGGGATCG CGAGGCCTCG GATCGCGGTC GCGGGCCTCA ACCCCCATGC AGGCGAAGGT GGGGCCATGG GCCGTGAGGA AATCGAGTTG ATTACACCGG TGCTGGACGA ATTGCGGGCC AATGGACTGA CCATCAACGG GCCTGCCTCT GCCGATACAA TGTTCCACGC AAGCGCTCGG GCGGGTTATG ACGTTGCAAT CGCGATGTAC CACGATCAGG CCCTGATCCC GATCAAGACG GTGGATTTCT CGGGCGGGGT GAACGTGACC CTCGGCCTGC CATTCATCCG CACGTCACCG GACCACGGCA CGGCGTTTGA TATCGCGGGC CAGGGCATCG CCGATGCGAC ATCGCTGATT GCCGCGTTGA AAATGGCGCG CGATATGGCT GTGGCGCGGG GCGAGACCCG ATGA
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Protein sequence | MAALPIALSV GEPAGIGPEI AARAWAALGA EIPFFVIGDP AHLAGHGAPL VKVAKASEAV AACRDGLPVL PHSFAEPAVP GRPDPANAQG VIDVIARGVD LVMRGEAAAL TTGPIHKKAL KDGAGFAFPG HTEYLAHLAG VRQVVMMLAC PELRVVPVTI HIPVAEVPRL LTAKLLRDTI RITEAALRQD FGIARPRIAV AGLNPHAGEG GAMGREEIEL ITPVLDELRA NGLTINGPAS ADTMFHASAR AGYDVAIAMY HDQALIPIKT VDFSGGVNVT LGLPFIRTSP DHGTAFDIAG QGIADATSLI AALKMARDMA VARGETR
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