Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1806 |
Symbol | prfA |
ID | 3934255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1794617 |
End bp | 1795681 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904158 |
Product | peptide chain release factor 1 |
Protein accession | YP_509748 |
Protein GI | 89054297 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0496443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.210435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAA CACTGCCCCG CGACCGCCTG CGACAGATCA CGGATCGGTT CGAATATCTG GAAGCGCAGC TCAACGGCGG GCCGGACCCT TCAGACATCG CCAAGATCAG CCGGGAATAT GCGGAGCTGA AGCCGGTCGT CGCCGAGATT GCGGGGTACG AGCAACTGCT GGCGGATATG GCCGAGGCGC AGAACATGCT GGCCGATCCT GACATGAGGC CCCTGGCGGA GGAGGAATTG CCCCGCCTGG AAGCCGCCAT CCCCGCCGCC GAGCAATCGC TGCAACTGGC GCTTCTGCCC AAGGATGCCG CCGACGCGAA GCCTGCAATG ATCGAGATCC GCCCTGGCAC CGGCGGCGAT GAGGCGGCTT TGTTCGCGGG TGATCTGTTG CGGATGTATA CGCGCTATGC GGAGGCGCGC GGCTGGCGGT TGGAGATCGT GGATCTGCAG GAGAGTGATC TGGGCGGCAT CAAGGAATGC ACTGCGCGGG TGGAGGGGGA GAATGTCTTT GCCCGGCTGA AGTTTGAGAG TGGCGTCCAC CGGGTCCAGC GCGTGCCGGA AACGGAATCG GGCGGGCGTA TCCATACCTC TGCCGCCACC GTCGCTGTGT TGCCGGAGGC CGAGGACGTC GACATTGACA TCCCCGCCAC CGATATTCGC ATCGACACAA TGCGCGCCAG CGGGGCGGGC GGGCAGCACG TGAACACCAC GGATTCAGCG GTGCGCATCA CCCATGTGCC CTCTGGCATC GTGGTCGTCA GTTCCGAGAA GTCCCAGCAC CGCAACCGGG AAATCGCGAT GCAGACGCTG CGCACCCGGC TCTATGATCT GGAACGGCAG AAGGCGGATG ATGCCATGGC CGCGGACCGC AAGGCGCAGA TCGGCTCGGG CGATCGCTCG GAGCGGATCC GCACCTATAA TTTCCCGCAA GGGCGCATGA CCGATCACCG CATTAACCTG ACACTCTATA AGCTGGATGC GGTGATGCTG GGGGATCTGG ACGAAATCGT CGACGCCCTG ACGGCAGAGG ATCAGGCCAT GAAACTGGCC GAGATGACCG GGTGA
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Protein sequence | MAATLPRDRL RQITDRFEYL EAQLNGGPDP SDIAKISREY AELKPVVAEI AGYEQLLADM AEAQNMLADP DMRPLAEEEL PRLEAAIPAA EQSLQLALLP KDAADAKPAM IEIRPGTGGD EAALFAGDLL RMYTRYAEAR GWRLEIVDLQ ESDLGGIKEC TARVEGENVF ARLKFESGVH RVQRVPETES GGRIHTSAAT VAVLPEAEDV DIDIPATDIR IDTMRASGAG GQHVNTTDSA VRITHVPSGI VVVSSEKSQH RNREIAMQTL RTRLYDLERQ KADDAMAADR KAQIGSGDRS ERIRTYNFPQ GRMTDHRINL TLYKLDAVML GDLDEIVDAL TAEDQAMKLA EMTG
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