Gene Jann_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1798 
Symbol 
ID3934247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1787308 
End bp1788168 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID637904150 
Producthypothetical protein 
Protein accessionYP_509740 
Protein GI89054289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.404133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.483155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACC TCAAAGGCAT GGGCTGGATG ACGCTGGCGA TGCTGGGGTT TGCCCTGGCG 
GACACCTTCA TCAAGCTGAC CCTCGGCGCA TTGCCCGTGG GCCAGGTCAT CGCCATTTTC
GGGTTCGGCG GCGCGTTGAT CTTCGGCGGA TGGGCCGCGG CCAAGGGCGA GCGTGTCTTT
GACGCTGCGC TGTTCACCGG GCCGTTTGTG CTGCGTTTGG GGGCGGAAGT CTTGGGCACG
CTGTGCTTCA TCATTGCGCT GGCCTCCATC GAATTGTCGC TTCTGTCGGC GATCATTCAG
GCCAATCCGC TTCTTGTGAC CCTGGGCGCG GCTTTGTTTC TAGGGGCCAG CGTCGGATGG
CGGCGGTGGG TCGCGATCCT GATCGGCCTT TTGGGCGTCC TGATCATCGT GCGTCCGGGC
CTGGAGGGGT TTGACGTCAA CAGCCTCTGG GCGCTGGGGG CGGCCGTCGG TCTGACCGGG
CGCGATCTGG CAACGCGGGC AATTTCACGC GATGTGTCGA CGCTGTTGCT AGCGGGATGG
GGCTTTGCCG CCGCGGGCAT GGCGGGGCTA TTGTTATTGG CCGTTACCGG AGGCGCGACC
CTGCCCGGCG GGTTGCTGAG CCTGCAATTG ACCGGTGCCT TGATCTTTGC GCTTGTGGCC
TATTACGCCG TGACCGCCGC GATGCGCATC GGTGACATCC CCGTTGTCAC GCCGTTCCGC
TACACGCGGC TGGTCTTCGC CCTGATCCTT GCCTTCTTCG TGTTCGGAGA GCGGCCGGAC
ATGTGGACGC TTGTGGGCGC CGCCATTGTC ATTGCGACCG GGCTCTACAC CCTCTGGCGA
GAGCGGCTGG CGACGACCTG A
 
Protein sequence
MDNLKGMGWM TLAMLGFALA DTFIKLTLGA LPVGQVIAIF GFGGALIFGG WAAAKGERVF 
DAALFTGPFV LRLGAEVLGT LCFIIALASI ELSLLSAIIQ ANPLLVTLGA ALFLGASVGW
RRWVAILIGL LGVLIIVRPG LEGFDVNSLW ALGAAVGLTG RDLATRAISR DVSTLLLAGW
GFAAAGMAGL LLLAVTGGAT LPGGLLSLQL TGALIFALVA YYAVTAAMRI GDIPVVTPFR
YTRLVFALIL AFFVFGERPD MWTLVGAAIV IATGLYTLWR ERLATT