| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1783 |
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| Symbol | ihfA |
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| ID | 3934232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1771684 |
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| End bp | 1771986 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904135 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_509725 |
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| Protein GI | 89054274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.783563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.198181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGGTA AGACTTTGAC GCGCATGGAC CTAAGCGAAG CGGTGTTCCG CGAAGTGGGC
TTGTCCCGCA ACGAAAGCTC TGAGTTGGTG GAGCGCGTTT TGCAGTTGAT GTCGGACGCG
TTGGTCGATG GAGAACAGGT GAAAGTCTCG TCCTTCGGCA CGTTCTCGGT CCGCTCCAAA
ACGGCCCGTG TGGGTCGCAA CCCGAAGACC GGGGAAGAGG TGCCGATCAG CCCGCGCCGC
GTGCTGACAT TCCGGCCCTC GCATCTGATG AAAGATCGCG TCGCAGCGGG CAACCGCAGC
TAA
|
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| Protein sequence | MSGKTLTRMD LSEAVFREVG LSRNESSELV ERVLQLMSDA LVDGEQVKVS SFGTFSVRSK
TARVGRNPKT GEEVPISPRR VLTFRPSHLM KDRVAAGNRS
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