| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1781 |
|---|
| Symbol | |
|---|
| ID | 3934229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1769463 |
|---|
| End bp | 1770548 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904132 |
|---|
| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
|---|
| Protein accession | YP_509723 |
|---|
| Protein GI | 89054272 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.153322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT CCACGCAAAC CCATCCCCAA GGCGTCCTGC CCGATCACGC AATTTCCGCG
ATGATCGAGA GCGGCGCGAT CACCGCCACG ATGCCCGTGC CCGACGGTCA GATCCAACCG
GCCAGCCTTG ATCTGCGGCT GGGGACCAAG GCCTACCGCG TGCGCGCCTC GTTCCTGACC
GGCGCGGGGC GCTCCGTGGC GGAGCGTCTG CCCGAATTCA CCATGCATGA GATGGACCTG
ACCCACGGCG CGGTGCTGGA AAAGGGCTGC GTCTACGTGG TGCCCCTGAT GGAGGGCCTT
GCCCTGCCCG GTGACATCAC CGCCGTGTGC AACGCCAAAT CCTCCACCGG GCGCGTCGAT
TGCCTGACCC GTGTGATCGC CGATGGCGGT GTCGAGTTTG ACCGTATTCC CGCAGGCTAT
ACCGGCCCGC TTTACGCGGA AATCTGCCCC CGGTCCTTCT CGGTCAAGAT CGCGCCCGGC
CTGCGCCTGA ACCAGATCCG CTTTCGCCGG GGGCAAGCCA CATTGACCGA CGCGGCGCTG
GCCGAGCGTC ACGCGCAGAC GCCCCTGGTG GACCAGACCC CGCTGATCGA CGACGGTCTC
GGCTTCTCCG TCGACCTCTC ACCCCAAGAC ACGACGCTTG TGGGCTACCG CGCCAAGCCC
CATGCGGGCG TCATCGACCT GACCCAGATC GGCGCCCACA AAACGGCCGA GTTCTGGGAA
GATATCCACA GCGACACCGG CCAGATCATC CTCGACCCCG GCGCGTTCTA TATTCTGGTA
AGCCGGGAAG CCGTCACCAT CCCCCCCGAT TGCGCCGCGG AAATGGCCCC TTATCTCGCC
ATGGTGGGCG AATTCCGTGT CCACTACGCA GGCTTCTTTG ACCCCGGCTT CGGCCACGGC
GTGCCGGCGC GCGGCGTGCT GGAAGTGCGC TGCCACGAGG CCCCGTTTGT GCTGGAGCAT
GGCCAGACCG TTGGCCGCCT GGTCTATGAG ACGATGGCCT CCGCCCCCAG CCAGCTCTAT
GGCACCGACA TCGCGTCAAA CTACCAAGGC CAGGGTCTCA AACTCTCCAA ACATTTCGCG
CCCTGA
|
|---|
| Protein sequence | MTDSTQTHPQ GVLPDHAISA MIESGAITAT MPVPDGQIQP ASLDLRLGTK AYRVRASFLT
GAGRSVAERL PEFTMHEMDL THGAVLEKGC VYVVPLMEGL ALPGDITAVC NAKSSTGRVD
CLTRVIADGG VEFDRIPAGY TGPLYAEICP RSFSVKIAPG LRLNQIRFRR GQATLTDAAL
AERHAQTPLV DQTPLIDDGL GFSVDLSPQD TTLVGYRAKP HAGVIDLTQI GAHKTAEFWE
DIHSDTGQII LDPGAFYILV SREAVTIPPD CAAEMAPYLA MVGEFRVHYA GFFDPGFGHG
VPARGVLEVR CHEAPFVLEH GQTVGRLVYE TMASAPSQLY GTDIASNYQG QGLKLSKHFA
P
|
|---|
| |