Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1780 |
Symbol | |
ID | 3934228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1768550 |
End bp | 1769344 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904131 |
Product | hypothetical protein |
Protein accession | YP_509722 |
Protein GI | 89054271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.443384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.229108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCATG TTCTACAAGA TCATTTGCCG TCCGCGCCGT GGATGGCAGA GGCCACGCGC CGGTTGCCGG GCTTGCAGCC GTTGGAGAGC GGCGCGCCGT GGCTGCAAAG GGACGAGGCG TTTGCCGGAC AGATGGCGGT GCGGGATCAA CTGGTTGCAG AGCGCCGTGC GGAGGTGATT GCGCAAATGC CGGGCTGTCA GGGCGCCGTG GCGGAGTTAT ATGGCGCGGT GCTGCGAGGG CTCGCCGGGT GTGATGGCTA CGCGGTTGGG CGAGGGGCGT GTGTGCGCCC CGATGGCGTA GATGTGCCGT TGGACGAGGG CGACCCCCTC GGCACGTTGG CGCGGCTGGT GCAGCAGGAT CTGTGCGTTT TGGAGAAGCC CGAGGGCGGT ATGGAGCATG TAATGAGCGC CGCGATCCTG TGCTTTCCGG CCAGTTGGTC CCTGGCCGAG AAGATTGGCC ACCCGCTGTC GCGCATTCAC GGACCGGTGA CGGAGTATGA TGGTCTGATG GAGCGGCGGG TGCAGCGCGT GTTCGACCAT TTGCGAGAGG ACAGCCCGGT CTGGCGACAA AACGCGCTGA TCTACGACGA CCCGCAGCTG TTCCAGCCCC GCCGCATGGA CGCCAGGCGG CCCAAGCCCA CGGGCGCGGG GTATCTGCGG TCGGAAAAAC AGGTGCTGAT GCGGTTACCC GTCACGCGGG CGGTGGTGTT CTCGATCCAC ACCTATGTCG TGGCGATGGA GGATCTGACG GCGGATCAGC GCGCCGGGCT GGCGGGTGTT GACCGGGTGA CGTGA
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Protein sequence | MDHVLQDHLP SAPWMAEATR RLPGLQPLES GAPWLQRDEA FAGQMAVRDQ LVAERRAEVI AQMPGCQGAV AELYGAVLRG LAGCDGYAVG RGACVRPDGV DVPLDEGDPL GTLARLVQQD LCVLEKPEGG MEHVMSAAIL CFPASWSLAE KIGHPLSRIH GPVTEYDGLM ERRVQRVFDH LREDSPVWRQ NALIYDDPQL FQPRRMDARR PKPTGAGYLR SEKQVLMRLP VTRAVVFSIH TYVVAMEDLT ADQRAGLAGV DRVT
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