| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1768 |
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| Symbol | infC |
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| ID | 3934216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1757083 |
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| End bp | 1757748 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637904119 |
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| Product | translation initiation factor IF-3 |
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| Protein accession | YP_509710 |
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| Protein GI | 89054259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
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| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.40976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGGGC CGCGAAATCA TGCTCTCTTG GGCGAAATTG AGCCGTTATC TGCCTTGAAG
AATAGGCGCG CGAGGGATAC CTTCGCATAT CAAACAGATG GCTACAAAAG GACCAATGTC
ATAGCCCGCA GACCCCATAA CGCGCCGCCG CAACGCGATA CCGGCCCCCG CGTCAACGAT
CGAATTCGCT CAGACAACGT CCGCCTCATT GGCGCGGAAG GTGAAAATCT CGGCGTGGTA
ACGCCCGCCC GCGCTATGGA TCTGGCGGCT GATGCCGACC TGGATCTGGT GGAAATCTCA
CCGAATGCAG ATCCCCCGGT GTGCAAGATC ATGGATTTCG GAAAGTATAA GTACGAGACC
CAGAAGCGCG AGGCCGAGGC CCGCAAGAAG CAGAAAACCA TCGACATCAA GGAAGTGAAG
ATGCGTCCGG GCACGGATGA TCACGACTTC AACCGCAAGG TGACGGATGC CGTGAAGTTT
CTGGAAGGCG GCGACAAGGT CAAGGTGACC TTGCGGTTCC GGGGCCGCGA AATGGCGCAC
CAGAACCTGG GTCGCGAGAT GCTGGAAAAG GTCGTCGATC GGATCGAGGG GATCGGAAAG
ATCGAATCCA TGCCCCGCAT GGAAGGCCGC CAGATGGTCA TGATGATCAA CCCGGTCAGC
AAGTAA
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| Protein sequence | MVGPRNHALL GEIEPLSALK NRRARDTFAY QTDGYKRTNV IARRPHNAPP QRDTGPRVND
RIRSDNVRLI GAEGENLGVV TPARAMDLAA DADLDLVEIS PNADPPVCKI MDFGKYKYET
QKREAEARKK QKTIDIKEVK MRPGTDDHDF NRKVTDAVKF LEGGDKVKVT LRFRGREMAH
QNLGREMLEK VVDRIEGIGK IESMPRMEGR QMVMMINPVS K
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