Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1730 |
Symbol | |
ID | 3934178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1721642 |
End bp | 1722985 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904081 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_509672 |
Protein GI | 89054221 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0814536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.731586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAA CGCCCGTCCT TTTCGTCGAT GATGAGCCTG ATCTGCGGAT CGCGGGCGAG CAGACCCTGT CACTGGCCGA TCTGCCGGTC ATTGCCTGCG CCCGGGCTGA GGCCGCCCTG GATCACATTT CGCCCGCCTT TCCCGGGGTG CTGGTCACAG ATATCCGGAT GCCCGGCATG GACGGAACCG CCCTGATGGC CGAAGCGCTC AGGCGCGACC CGGATCTGCC AGTGATATTG GTGACGGGGC ACGGTGATGT GGACCTGGCG GTGCACAGCA TGCGGCTGGG GGCTTATGAC TTCATCGAAA AACCCTACGC GCCGGACCGA TTGGTGCAAG TGATCCGCCG CGCGCTGGAC AAGCGCCGCC TGACGATGGA GGTGCGCGCC CTGAAGGCGC AGGCCGCAGA TGGCAGCGCG GATCCGATCT CCGCACAACT TATCGGGCGC TCCACCGCCA TGGCGCAGCT GCGCGCGCAA TTGAAGGCGG TGGCCGAGAC GGAAACCGAT GTGTTGATCG AAGGGGCCAC CGGCACGGGC AAGGAGGTGG CGGCGCGCGC GCTCCACGCG GCCTCGGCCC GGGCGGCCAG GCCCTTTGTC GCGATCAATT GCGCCGCCCT GCCCGAGACG CTGATGGAAA GTGAGCTGTT TGGCCACGCT CCAGGTGCCT TTGAAGGCGC CACACGGGAG CGTTACGGCA AGTTCCAGCA CGCCCGCGGT GGCACCCTGT TTCTGGATCA GATCGACAGC ATCCCCCTGC CCCTGCAAGG CAAATTGCTG ACCGCCCTGC AGGACCGCGC GATCACCCCC CTGGGCACGA ATGAAGCCGT TGCCCTTGAT CTGCGCGTCA TCGCGGCCTC CAGACGCGAT CTGGCGCAAG CGGCGGCAGA GGGCGCGTTT CGGGATGATC TGCTCTACCG CCTCAACGTT GTGACCCTGC GGATGCCGCC GCTGGCGGAG CGGCGCGAAG ACATTCCCGG CCTCTTCCAG ATCCTGCTGG CCAATGCGTC CGCCCGGCAC AACCGTCCGG TGCCTGCGGT CTCGCCCGAT ATGCTGGCAG ATCTCGCCTC ACGCGACTGG CCCGGCAATA TCCGCGAGCT GCGCAATGAG GCCGAGCGCG CGATCCTGGG GCTGGGACAT GGCGGCGCGG CGTCGGAGAC GGGACGGCTT GCCGATCAGA TGGCCGCCCA TGAACGCAGC CTGATTGCCG CTACACTCAG CGCCCAGAAC GGCTCGATCA AGGCGACATA TGAGGCGCTG GGGATCAGCC GCAAAGCCCT CTACGAGAAG ATGCAGAAAC ACGGGCTTGC GCGCGACGAC TTTCGTCCCG CCGACCGCGC GTAA
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Protein sequence | MTQTPVLFVD DEPDLRIAGE QTLSLADLPV IACARAEAAL DHISPAFPGV LVTDIRMPGM DGTALMAEAL RRDPDLPVIL VTGHGDVDLA VHSMRLGAYD FIEKPYAPDR LVQVIRRALD KRRLTMEVRA LKAQAADGSA DPISAQLIGR STAMAQLRAQ LKAVAETETD VLIEGATGTG KEVAARALHA ASARAARPFV AINCAALPET LMESELFGHA PGAFEGATRE RYGKFQHARG GTLFLDQIDS IPLPLQGKLL TALQDRAITP LGTNEAVALD LRVIAASRRD LAQAAAEGAF RDDLLYRLNV VTLRMPPLAE RREDIPGLFQ ILLANASARH NRPVPAVSPD MLADLASRDW PGNIRELRNE AERAILGLGH GGAASETGRL ADQMAAHERS LIAATLSAQN GSIKATYEAL GISRKALYEK MQKHGLARDD FRPADRA
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