| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1723 |
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| Symbol | uvrA |
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| ID | 3934171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1711211 |
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| End bp | 1714084 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904074 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_509665 |
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| Protein GI | 89054214 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.30006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC TGAAGAACAT CGAGGTGCGC GGTGCGCGCG AGCATAACCT CAAGGATATC
GACGTCGATA TCCCGCGCGA TCAGCTGGTG GTGATCACCG GTCTGTCGGG CTCCGGCAAG
TCGTCGCTGG CCTTTGACAC GATCTATGCG GAGGGGCAGC GGCGTTATGT TGAGTCGCTG
TCGGCCTATG CGCGGCAATT CCTTGATATG ATGGAGAAAC CGGACGTCGA CCATATTTCC
GGCCTGTCGC CCGCGATCTC GATTGAACAG AAGACGACGT CGAAAAACCC CCGCTCCACC
GTCGGCACCG TGACCGAGAT TTACGACTAC CTCCGCCTGC TGTTCGCGCG CGCGGGCACG
CCCTACAGCC CCGCCACCGG CCTGCCAATT GAGGCGCAAC AGGTCCAGGA CATGGTCGAC
CGCGTCATGG CGATGGAGGA GGGGACGCGC GCCTATCTGT TGGCCCCGAT CATCCGCGAC
CGCAAAGGTG AATACCGCAA GGAATTCACG GAGTTGCGCA AGCAGGGCTT CCAGCGCGTG
AAGGTGGACG GGCAGTTTTA TGAGCTGGAC GAGCCGCCCA CGCTGGACAA GAAATTCCGC
CACGACATTG ACGTGGTGGT GGACCGGATC GTGGTCCGCG ACGGGGCGGA GACGCGGCTG
GCGGACAGTT TCCGCACGGC GCTGGACCTG GCCGACGGGA TCGCGGTGCT GGAAACGGCT
GTGAAAGAGG GCGAGGACGC TGAGCGCTTC ACCTTCAGCG AAAAATTTGC CTGTCCGCAG
AGCGGCTTCA CCATCCCCGA GATTGAGCCG CGATTGTTCT CCTTCAACGC CCCGTTCGGC
GCGTGTCCGT CCTGCGACGG GCTGGGTGTG GAGCTGTTTT TCGACGAAGG TCTGATGGTG
CCCGACAAGG CGCTGAGCCT CGAAGACGGC GCGATTGCCC CGTGGCGCAA GGGGAAATCT
CCGTATTTCG TTCAGACGAT CGAGGCGATT GCCAAGCACT ACGGCTTTGC GGCCAAGACC
AAGTGGAAGG ACCTGTCGCC CGATATTCAG CAGGTGTTTC TGCGCGGGTC GGGTGAGGAG
GAGATCAAGT TCCGCTACGA CGAAGGCGGG CGCGTTTACC AAGTGGAACG CACGTTCGAG
GGTGTGATCC CCAATATGGA GCGTCGGTAT CGCGAGACCG ATAGCGCCTG GATTCGCGAG
GAATTTGAGC GGTTCCAGAA CAACCGCCCC TGCGGCGATT GCGGCGGGTT TCGCCTGCGG
CCCGAGGCGT TGGCCGTGAA GATTGGTCCA TCGGACAGGC TCCTCCATGT GGGGCAGGTC
GTGCAGATGT CGATTGCGGA GGCGTTGGCC TGGGTCGACA CGGTCCCCGA CGCGCTGAGC
AAACAGAAGA ATGAGGTCGC CCGCGCGATC CTGAAGGAAA TTCGCGAGCG GCTGGGGTTC
CTGAACAATG TGGGCCTGCA ATACCTGACC CTGTCGCGCA ACGCGGGCAC GCTGTCCGGT
GGCGAGGCGC AGCGGATCCG GCTGGCATCC CAGATCGGGT CCGGCCTCAC GGGCGTGCTC
TATGTGCTCG ATGAGCCGTC CATCGGCCTG CACCAGCGCG ACAATGACCG GCTGTTGACG
ACGCTGAAAA ACCTGCGCGA TCAGGGCAAT ACGGTGATCG TGGTGGAACA TGATGAGGAA
GCGATCCGGG AGGCGGACTA CGTCTTCGAT ATCGGTCCAG GGGCGGGCGT CCATGGCGGG
CAGGTGGTGG GGCACGGCAC GCCCGCCGAT CTGATCGCGA ATTCCAAATC CATCACCGGC
GATTATCTGG CAGGCCGTAA GGAAATCGCC GTGCCGGTCA AGCGGCGCAA GGGCAACAAG
AAGAAGCTGC AGGTGGTGAA GGCCACGGGC AACAACCTGC AAAACGTGAC CGCAGATTTC
CCGCTGGGGC AGTTTGTCTG CGTCACCGGC GTGTCCGGCG GCGGTAAATC GACCCTGACG
ATTGAGACCT TGTTCAAAAC GGCGTCGATG AAGCTGAACG GCGCGCGGCA GACGCCTGCG
CCGTGTGAGA CGATCAAGGG GCTGGAGCAT CTGGACAAGG TGATCGACAT CGACCAGCGC
GCCATCGGGC GGACGCCGCG GTCGAACCCC GCCACCTATA CCGGGGCCTT CACACCGATC
CGCGACTGGT TTGCGGGCCT GCCGGAATCG AAAGCGCGCG GGTACAAGCC GGGGCGGTTT
TCGTTCAACG TCAAAGGTGG CCGGTGCGAG GCCTGTCAGG GCGACGGCCT GATCAAGATC
GAGATGCACT TCCTGCCCGA CGTCTACGTC CAATGCGAGA CCTGCAAAGG CGCGCGCTAC
AACCGCGAAA CGCTGGAGAT CAAATTCAAG GGCAAATCCA TTGCCGACGT GTTGGATATG
ACGGTGGAGG ACGCGCAGGA TTTTTTCAAG GCGGTGCCGA GCATCCGCGA AAAGATGGAT
GCTCTGGTGC GGGTGGGTCT GGGCTACATC AAGGTCGGTC AGCAGGCCAC GACGCTGTCG
GGCGGAGAGG CGCAGCGGGT GAAACTATCG AAGGAGCTGG CTAAACGCTC AACCGGGCGC
ACGCTCTATA TTCTGGATGA ACCGACCACG GGTCTGCATT TTGAGGACGT GCGCAAGCTG
TTGGAAGTGC TGCATGAATT GGTGGATCAG GGGAATTCTG TTCTGGTGAT TGAACACAAC
CTCGATGTGG TGAAGACCGC CGACCATATC ATCGATATCG GGCCGGAGGG CGGCGATGGC
GGCGGGCAGA TCGTGGCCAA GGGCACGCCC GAACAGGTGG CAAAGGTGCC CGAGAGCCAT
ACCGGGCGCT ACCTCGCCCC GATGCTGGAT GCGCGAAAGC ACGCGGCGGA ATAG
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| Protein sequence | MAELKNIEVR GAREHNLKDI DVDIPRDQLV VITGLSGSGK SSLAFDTIYA EGQRRYVESL
SAYARQFLDM MEKPDVDHIS GLSPAISIEQ KTTSKNPRST VGTVTEIYDY LRLLFARAGT
PYSPATGLPI EAQQVQDMVD RVMAMEEGTR AYLLAPIIRD RKGEYRKEFT ELRKQGFQRV
KVDGQFYELD EPPTLDKKFR HDIDVVVDRI VVRDGAETRL ADSFRTALDL ADGIAVLETA
VKEGEDAERF TFSEKFACPQ SGFTIPEIEP RLFSFNAPFG ACPSCDGLGV ELFFDEGLMV
PDKALSLEDG AIAPWRKGKS PYFVQTIEAI AKHYGFAAKT KWKDLSPDIQ QVFLRGSGEE
EIKFRYDEGG RVYQVERTFE GVIPNMERRY RETDSAWIRE EFERFQNNRP CGDCGGFRLR
PEALAVKIGP SDRLLHVGQV VQMSIAEALA WVDTVPDALS KQKNEVARAI LKEIRERLGF
LNNVGLQYLT LSRNAGTLSG GEAQRIRLAS QIGSGLTGVL YVLDEPSIGL HQRDNDRLLT
TLKNLRDQGN TVIVVEHDEE AIREADYVFD IGPGAGVHGG QVVGHGTPAD LIANSKSITG
DYLAGRKEIA VPVKRRKGNK KKLQVVKATG NNLQNVTADF PLGQFVCVTG VSGGGKSTLT
IETLFKTASM KLNGARQTPA PCETIKGLEH LDKVIDIDQR AIGRTPRSNP ATYTGAFTPI
RDWFAGLPES KARGYKPGRF SFNVKGGRCE ACQGDGLIKI EMHFLPDVYV QCETCKGARY
NRETLEIKFK GKSIADVLDM TVEDAQDFFK AVPSIREKMD ALVRVGLGYI KVGQQATTLS
GGEAQRVKLS KELAKRSTGR TLYILDEPTT GLHFEDVRKL LEVLHELVDQ GNSVLVIEHN
LDVVKTADHI IDIGPEGGDG GGQIVAKGTP EQVAKVPESH TGRYLAPMLD ARKHAAE
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