| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1661 |
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| Symbol | |
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| ID | 3934109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1644460 |
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| End bp | 1645680 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904012 |
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| Product | major facilitator transporter |
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| Protein accession | YP_509603 |
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| Protein GI | 89054152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.171561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC CCACCCTCTT CATCCTGATC ACGGTCACCA TCGACGCGAT GGGCATCGGC
CTGATCCTGC CCGTCATGCC CGACCTGATC ACCGAGGTGC GCGGCGCGGG TCTTGCCAAC
GCGGCCCTTT GGGGCGGCCT CCTATCCACC ACCTACGCGG TAATGCAATT CCTCTGCTCC
CCCACCCTCG GCAACCTGTC GGACAGGTTT GGCCGCCGCC CCATCCTCCT GATATCGCTG
GCGGTTCTCG CCGCCGACTA CGTCGTGATG AGCCTCGCCC ACACCATCTG GATCCTGATC
GCGGGCCGCA TCGTGGCGGG CATCGCGGCG GGCACGCACG CCACGGCGCT GGCCTATATG
GCCGACATCT CTCCGCCCGA AAAACGCGCC CAGAACTTCG GCCTGATCTC TGCGGGTTTC
GGCATAGGCT TCGTCCTCGG TCCCCTCGTC GCAGCGTTTC TGGGCGAGTT CGACCCGCGC
GCGCCCTTTG TGGCCGCTGC GTGCCTGGCC GCTGCCAACT TCGCGTTCGG ATACTTCATC
CTGCCCGAAA GCCTGCCCAA GGATCGCCGC CGCCCGTTCC AGTGGCGCCG TGCCAACCCG
GCGGGCGGGC TTTTGCAAAT TGGCGCTCTG CCCGGCGTGC GCCTGTTGCT GATGGTGATG
CTGGCCTACC AGATCGCCAA CTTCGTCTAC CCCGCAATCT GGGCCTATTA CGGCCAGGCA
GCGTTTGGCT GGACGTCACG CATGATCGGC CTGTCGCTGA CCGTCTACGG GATTTCGATG
GCCGTCGTGC AGGGCGGGCT GATCCGCCTG GTCCTCCCGC GATTGGGCGA GACGCGAACA
GTCTATTGGG GCCTGATCCT CAATGTGTGC TGCCTGATCT GCTATGGCCT GGCGACCGAG
GCCTGGATGA TCTGGGCCCT GATCCCGGTC TCCGCGATGG GTGCAGTGGT CGCCCCGGCC
ATGCAAGGCG TGATGAGCCG GGCGGCAGGG GCCGACCAGC AGGGAGAGCT TCAGGGCGTC
CTCGCCTCCA TTTCATCCCT GTCGATGATC CTCAGCCCGA TCGTCATGAC GCAGGCCTTC
TTCTGGTTCA CCCGGGACGA GGCCATTCTG CGCCTGCCCG GCGCGCCGTT TCTTGTGGCC
GCCGTCCTCA TGGCCGGTGC CTTCGCCATC TTCGCCATCC GCCACGGACG CGCTCGCCCG
ACCCCGCGAG AGGCCGCCTA G
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| Protein sequence | MRLPTLFILI TVTIDAMGIG LILPVMPDLI TEVRGAGLAN AALWGGLLST TYAVMQFLCS
PTLGNLSDRF GRRPILLISL AVLAADYVVM SLAHTIWILI AGRIVAGIAA GTHATALAYM
ADISPPEKRA QNFGLISAGF GIGFVLGPLV AAFLGEFDPR APFVAAACLA AANFAFGYFI
LPESLPKDRR RPFQWRRANP AGGLLQIGAL PGVRLLLMVM LAYQIANFVY PAIWAYYGQA
AFGWTSRMIG LSLTVYGISM AVVQGGLIRL VLPRLGETRT VYWGLILNVC CLICYGLATE
AWMIWALIPV SAMGAVVAPA MQGVMSRAAG ADQQGELQGV LASISSLSMI LSPIVMTQAF
FWFTRDEAIL RLPGAPFLVA AVLMAGAFAI FAIRHGRARP TPREAA
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