| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1646 |
|---|
| Symbol | |
|---|
| ID | 3934094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1628382 |
|---|
| End bp | 1632833 |
|---|
| Gene Length | 4452 bp |
|---|
| Protein Length | 1483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903997 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509588 |
|---|
| Protein GI | 89054137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.734787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC TTCTCCTTTC AGCCGCAGGT GCCGCAGCGG GTGGCCTGAT CTCGACGCCC
ATTCTTGGTA TGTCCGGGGC GGTCCTGGGC CGCGCCATCG GTGCGACCAT CGGGCGGGTC
ATTGATCAAC GCCTCATGGG AACCGGATCG GAACCGGTCG AGGTGGGGCA GACAGACCGG
TTGCGTATCA CAGGCGCCGG AGAAGGTGCC CCTATTGCAC AGCTCTACGG GCGCATGCGC
TTGGGGGGGC ACGTCATCTG GTCCACGCAG TTTCTGGAGC GGAAGACCAC CACAGGCGGC
AGCGGCAAGG GCGCGCGTCC GCAACCGACC CCGCAAACGA CGACGTATTC TTATAGCATA
AGCCTGGCCA TTGCGCTTTG TGAAGGCGAG ATCGCCCGGG TTGGTCGGAT CTGGGCCGAT
GGGGTGGAAA TTAACCGCGA ATCCATCACG TGGCGGCTCT ACAAGGGCAG TCAGACACAG
ATGCCTGACC CGCTTTTGGA GGCGGTCGAG GGGGCGGGCG CGGTCCCGGC CTATCGTGGC
ACCGCATATG TGGTGCTGGA GGACCTGGAC CTGTCACCCT ATGGCAACCG GGTGCCGCAG
TTCGCTTTCG AGGTGGTGCG CCCTGCGCAA CCCGACCTTC CCCATGTGCC CAGTGCCGCT
GAGGCTGTGC GTGCCGTGGC GCTGATGCCG GGCACGGGGG AATACGCCCT GGCCACGACC
GCAGTAAGCC GAAAGTACGG TTTGGCGCTT GGCACATCAG CGAATGTCAG CGCCGAGGGG
GGTGTGACGG ATTTCGCGCA ATCGCTCGGG CAATTGCGCG ATACGCTGCC CAACCTGGAG
TCGGTCTCTC TGATCTATTC ATGGTTCGGT GATGATTTGC GCACGAGCCG GTGCAAGGTG
CGCCCAAAGG TGGAGCAGCG TGAGTTCGAT GGTGTCGAGA TGCCATGGAC TGCGGGCGGC
ATAACACGCG GTCAGGCACA GGCGATTGCG CAAGTGGATG GACGCCCGAT CTATGGGGGC
ACGCCCGCCG ACCGATCCGT GCTGGAGGCA ATTGCGGCGA TCCATGCCGG TGGCCAGAAG
GTCACCTTCT ATCCGTTTTT GCTGATGGAG CAATTGGCGG GGAACGGGCT TCCCGACCCT
TACGGCGGGG CAGAGCAGGC GCCGTTGCCA TGGCGGGGCC GGATGACCGG AGACCTTGCG
CCCGGGCAGG CGGGATCACC GGATGGGACG GCGGCCAACC GGGCTGCTGT GGCCGCGTTT
TTTGGCAGCG CAATGGCCTC GGATTTCAGC ACCGGAATCG GAGGCGTCCA ATACTCCGGG
CCGCAGGATT GGAGCTACAG CCGCTTCATC CTGCACTGCG CCGCGTTGTG TCGGCAGGCG
GGGGGCGTGG AGGCCTTTTG CATCGGGTCC GAGATGCGCG GACTGACCCA GATGCGAGAT
GATTTCGGAT TCCCGGCCGT GGATGCCTAC ATCGCACTGG CGGCACAGGT GCGCGCGCTT
CTGCCCACGG CCAAGATCAC CTATGCCGCT GATTGGTCGG AATATTACGG GTATCAGCCG
CAGGACGGAT CTGGTGACCT ATATTTCCAC CTCGATCCAC TTTGGGCAGA CCACAACATC
GATGTCATCG CGATCGACAA CTACATGCCG CTCAGCGACT GGCGCGATGG AGCGGAGCAT
CTGGACTACG ACAACGGTCC GATCCATGCG CTCGATCACC TGAAATCCGG CATCGAGGGT
GGTGAGGGCT ATGACTGGTA TTATCCCGAT CCGGAAGCCA GGGCCACGCA ACAGCGCGCG
CCGATCACGG ACGGGAATGG TGCGCCGTGG GTTTACCGTT TCAAGGACCT GCGCAATTGG
TGGCAAAACA ACCATGTTGA GCGGCGCGGC GGCGTTCCGC TTGGCCAGTT GAATGTGGTC
GGGCCAACCT TTGACGCAAC CCACGCCACC GGGACCTACT GGCTGGACGG CCACACCTAC
GCAACATCCG CTCTGGCCGG GGCGAGCACC GCCCAAAGTG CCGTGTCCGT TGAGCGAATC
GACGTTTCCG GTGAAGGTTG GGTATTGCAG GCCAGCGATG ATGATCGAAC CATATCCGAG
CGGTCCGCGC GGGCGTTTGT TCCGGGGCAG CTGATCCGCG TGACCCTGCG CACCCGTTTG
CTTGCTGAGC CCGCGGACGG TCAGCCGCAT CGGCATGTTG TCTCGCTGAC CTCCCATCTG
GCGGACGGCA GCTTTGATGG ACTGCGCTCT GTCGCGTTTT GGGAGGGGCT GACCGTCGCC
GACGGGTGGG TCGAGCGGGT CGTGGAGTTT CGCCCGTCTG ATCTGCTCGG CGACGGCCAG
ATTTCGCAGA ACGCAGCATC CTGGCGTCTA GCGCTGGGGC TGAATGGAGC GACGCCGCAT
TCTGCCGCTG GGGCGATCCA GCAGATCTCT TCGATCAGGA TTGAGGACGC AAACGTCAAG
ACGGCGTGGG TGCCGCAGTC CAAACCGATC TGGTTCACCG AGTTTGGTTG CGCGGCCATC
GACAAGGGCA CCAATCAGCC CAACAAATTC CTCGATCCCA AATCCTCAGA AAGCAGCCTC
CCGCACTTTT CGAACGGGCG GCGGGACGAT TTGATCCAGG CGCAATATCT GCGCGCCACA
ATGGACTATT GGGCGGAACC TGGGAGAAAT CCGCAATCCA ATCAATATAA TGGGCCGATG
TTGGATATGG GCCGGGCCCA TGCCTGGGCG TGGGACGCGA GGATGTGGCC CGCCTTTCCC
AACGACTTGG CGAAGTGGAG CGATGGCACA AACTGGCTGC GCGGCCACTG GGTCACGGGG
CGCCTCGACG GGCAACCGCT TGATCTGGTT GTCGCCGACA TTTGCGAAGT GGCGGGGATC
ACGGACTACG ATGTCTCGTC ACTGTTCGGT CTGGTGCGGG GCCATGTGTC GGCCCAGACC
CAAAGCGCGC GGGCCAGATT GCAACCGCTT ATGCTCGCCT ATGGCTTTCA GGCGGTAGAG
CGGGACGGAA AGCTGGTCTT CCTTCCGGCG CCCGAGAGAC CGCAGCAGAT CATCGAAGCG
CCCCTGACGG CACGGGACGA TGATGGGGAG GGCGGCTTCA CCCATGTTCG CGCCCCGGAT
GCCGAGACCG TGGGCCGCTT GCGCATCGGA TATACCGAGG CTGAGGGTGC ATATGTCAGC
AAGGTGGCAG AGGCGATTTT CCCCGGGGAT GGCGCCGATC AGGTCAATGA CGTGGACCTT
CCGCTGGCCC TGACATCAGC CGAAGGTCAG GGCATGGCCG AGCGCTGGTT GGCGGAGGGC
CGCGTGGCAC AGGACACGCT GCGCTTTGCG TTGCCACCCT CCGAGCGGGC GCTGGGCGCG
GGAGCGGTTA TCGAAACGGA AGACGGGCAT ACATGGCGGA TTGATCGGGT GGAAGATCGC
GGCTTCCGGC AGATAGAGGC GGTTCGCATC GCCTCGTCAG CCTATGTCCC ATCGGAAGAC
GTCGACGATA TGCCAATTGT CGAGGCGTTC GTGCCCCCGT TGCCGGTCAC GCCCATTTTC
CTGGATCTGC CGCTTCTGAC GGGAGATGAG GTGGAGCACG CCCCGCATCT GGCTGTGGCG
GCCGACCCTT GGCCGGGTGC TGCGGCGGTC TATTCCGCTC CGGGTCCCGA TGGGTTCACC
CCGAATACGT TGGTGGAACA GCCCGCGATC GCTGGGACGC TCATGCAACC CATGTCCGCG
CAACCGCCGG GGATCTGGGA CCGCTCGGGC AAGATCCAGA TCCGGCTGGA AACGGGTAGC
CTGTCGTCGG TGGACCGCGC GACGGTTTTG TCCGGGGCCA ATGCGGCGGC CATCGGATCG
GGCGACGACG ACCTCTGGGA AGTGATACAA TTCGCCGACG CGACACTGGT GGGACCCGAT
ACTTGGGAAA TCGGCTTGCG TCTACGTGGC CAGCAGGGAA CCGACGCGGT GATCCCGGAG
GTCTGGCCGA CGGGCAGCCT GTTCGTGCTT CTCGACAGCG CGGTGGGACA AGTTGAACTG
CCAAGTTCGA CCAGAGGGTT GGAGCGCTAC TGGCGCGTCG GCTCGTCCCG CCGACCGGTG
GACGACGCCA CCTATGTCGA AAAGGTGTTG GCTTTCCAAG GTATTGGGTT GCGGCCCTAC
AGCCCGGTGC ACCTGCGCGC GCCCCGAGCG GTTGCCGGTC GTGGCATCCG CTGGATCCGC
CGCTCGCGGA TTGATGCGGA TACCTGGGAT GGCCCGGACG TGCCTTTGGG TGAGGCGTCC
GAGCAGTACA TCCTGCGTGT TCAAGACGGC ACGGCGCTGC GGCGCGAGGT TCTGCTGAGC
ACGCCCATGT TCACCTACAC CGATGCGATG CGCGCCAGCG ATGGCACGCT GAGCGACTAT
TTCATCGAGG TTGCTCAAGT CTCCGAACGG TTCGGAGCGG GGCCATTTGC AAGGATTCAG
ATCAATGACT GA
|
|---|
| Protein sequence | MATLLLSAAG AAAGGLISTP ILGMSGAVLG RAIGATIGRV IDQRLMGTGS EPVEVGQTDR
LRITGAGEGA PIAQLYGRMR LGGHVIWSTQ FLERKTTTGG SGKGARPQPT PQTTTYSYSI
SLAIALCEGE IARVGRIWAD GVEINRESIT WRLYKGSQTQ MPDPLLEAVE GAGAVPAYRG
TAYVVLEDLD LSPYGNRVPQ FAFEVVRPAQ PDLPHVPSAA EAVRAVALMP GTGEYALATT
AVSRKYGLAL GTSANVSAEG GVTDFAQSLG QLRDTLPNLE SVSLIYSWFG DDLRTSRCKV
RPKVEQREFD GVEMPWTAGG ITRGQAQAIA QVDGRPIYGG TPADRSVLEA IAAIHAGGQK
VTFYPFLLME QLAGNGLPDP YGGAEQAPLP WRGRMTGDLA PGQAGSPDGT AANRAAVAAF
FGSAMASDFS TGIGGVQYSG PQDWSYSRFI LHCAALCRQA GGVEAFCIGS EMRGLTQMRD
DFGFPAVDAY IALAAQVRAL LPTAKITYAA DWSEYYGYQP QDGSGDLYFH LDPLWADHNI
DVIAIDNYMP LSDWRDGAEH LDYDNGPIHA LDHLKSGIEG GEGYDWYYPD PEARATQQRA
PITDGNGAPW VYRFKDLRNW WQNNHVERRG GVPLGQLNVV GPTFDATHAT GTYWLDGHTY
ATSALAGAST AQSAVSVERI DVSGEGWVLQ ASDDDRTISE RSARAFVPGQ LIRVTLRTRL
LAEPADGQPH RHVVSLTSHL ADGSFDGLRS VAFWEGLTVA DGWVERVVEF RPSDLLGDGQ
ISQNAASWRL ALGLNGATPH SAAGAIQQIS SIRIEDANVK TAWVPQSKPI WFTEFGCAAI
DKGTNQPNKF LDPKSSESSL PHFSNGRRDD LIQAQYLRAT MDYWAEPGRN PQSNQYNGPM
LDMGRAHAWA WDARMWPAFP NDLAKWSDGT NWLRGHWVTG RLDGQPLDLV VADICEVAGI
TDYDVSSLFG LVRGHVSAQT QSARARLQPL MLAYGFQAVE RDGKLVFLPA PERPQQIIEA
PLTARDDDGE GGFTHVRAPD AETVGRLRIG YTEAEGAYVS KVAEAIFPGD GADQVNDVDL
PLALTSAEGQ GMAERWLAEG RVAQDTLRFA LPPSERALGA GAVIETEDGH TWRIDRVEDR
GFRQIEAVRI ASSAYVPSED VDDMPIVEAF VPPLPVTPIF LDLPLLTGDE VEHAPHLAVA
ADPWPGAAAV YSAPGPDGFT PNTLVEQPAI AGTLMQPMSA QPPGIWDRSG KIQIRLETGS
LSSVDRATVL SGANAAAIGS GDDDLWEVIQ FADATLVGPD TWEIGLRLRG QQGTDAVIPE
VWPTGSLFVL LDSAVGQVEL PSSTRGLERY WRVGSSRRPV DDATYVEKVL AFQGIGLRPY
SPVHLRAPRA VAGRGIRWIR RSRIDADTWD GPDVPLGEAS EQYILRVQDG TALRREVLLS
TPMFTYTDAM RASDGTLSDY FIEVAQVSER FGAGPFARIQ IND
|
|---|
| |