Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1619 |
Symbol | |
ID | 3934067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1607597 |
End bp | 1608811 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637903970 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_509561 |
Protein GI | 89054110 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.293091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTCGCA TTTCGCCCGC TCTCTCTCTC AGTCCGCTCC TCGCTGTGCT CCTCGCCGGG GCCTCTTTGG CGCAAGCCCC CGTTGACGAC GGCACGGCAA ATTTGCCCGA TACCATCCCC GCCTTCGAAG GCCAGACAGA CGCGCCAGAG ATCAACTCAG GCGCGACCTT CGACGAAGAG GTCATCACCG GCGCGCTGTC CCGGCCCTGG GGCCTTGCCG TGTTGCCCGA CGGCGCGGGC TACATCGTGA CCGAACGGGG CGGCACCCTG CGGCACATCA CCCGCGATGG CACCATGGGC CCCGAAATAT CCGGCGTGCC GAACGTGCGT GCGATGCGCC AGGGCGGTCT GCTTGATGTG ACCCTTGCCC CTGATTTCGA CGACAGCCGT ATCTTGTATC TGACCTACGC CGCGCGCGAT GGGCTGGCCG GGTCCGCCAC CGCCCTGGCC CGCGCCACCC TGTCCGACGA TCACACCGCA CTGGAGCAGG TGACAGAGCT CTGGCGACAA ACCCCGGCCT CCGCCATCCC CGCCCATTTC GGCAGTCGGG TGATCGTTCA GCCCGACGGT GGGCTGATCG TGACCACCGG GGACCGCTTC ACCTCGGAAA ACCGCCAGTT GGCCCAAGAT CCCGTCAACG CCGCCTACGG GGTTGTCGTG GGGTTCCTGC CCGATGGGTC TCCCACCGCC AACGACGCCC TTCGCGACGT CTTGCCCGGC ATCGTCAGCT ACGGACACCG CAATAGTCAG GGCGCTGCCA TCCAGCCCGG CACCGATCTG TTATGGACCC TCGAACACGG TCCTGCGGGC GGCGACGAGC TTAACATTAT CGAAGAGGGC GGCAATTACG GCTGGCCCAT GGTCAGCTAC GGGGTGAATT ACAACGGCTC TGATGTGGGC AGTGGCGAAC AGGCCCATGC CCCCGATTTC ATTGAACCCC GCTACTTCTG GGACCCGTCC ATCGCGCCGT CGGACATGGT GTTCTACGAC GGCGACATGT TCCCGGACTG GCAGGGCGAT ATCCTCCTGG GTGCGCTGGC CGGGCAGGCC CTTGTGCGGC TGGATATCGA CGGGACCTCC GTCATCGGGG AGGAGCGGTT CCGCACCGGA GAGGGCCGCG TGCGCGATGT GGAACTCGAC GCCGACGGCG CGATCCTGAT CCTGATCGAC GATGATCCGG GCGCGCTGAT CCGGCTGACG CCCGCTGCGG GCTAG
|
Protein sequence | MLRISPALSL SPLLAVLLAG ASLAQAPVDD GTANLPDTIP AFEGQTDAPE INSGATFDEE VITGALSRPW GLAVLPDGAG YIVTERGGTL RHITRDGTMG PEISGVPNVR AMRQGGLLDV TLAPDFDDSR ILYLTYAARD GLAGSATALA RATLSDDHTA LEQVTELWRQ TPASAIPAHF GSRVIVQPDG GLIVTTGDRF TSENRQLAQD PVNAAYGVVV GFLPDGSPTA NDALRDVLPG IVSYGHRNSQ GAAIQPGTDL LWTLEHGPAG GDELNIIEEG GNYGWPMVSY GVNYNGSDVG SGEQAHAPDF IEPRYFWDPS IAPSDMVFYD GDMFPDWQGD ILLGALAGQA LVRLDIDGTS VIGEERFRTG EGRVRDVELD ADGAILILID DDPGALIRLT PAAG
|
| |