Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1596 |
Symbol | |
ID | 3934044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1578433 |
End bp | 1580898 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637903947 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_509538 |
Protein GI | 89054087 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.26338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATC TGCCAAACAC GGCACGGGTT GTCATCATCG GGGGCGGGGT CGTCGGAACC TCGGCCCTCT ACCATTTGGC GATGGGCGGT TGGACGGATT GTGTTCTGTT GGAGAAGAAT GAGCTGACGG CGGGCAGTAC GTGGCACGCG GCGGGCAATT GTCCGAATTT CTCGACATCG TGGGCGGTAC TGAACATGCA GCGCTATTCG TTGGAGATGT ACCGGACGTT GGCCGAAAAG GTCGACTATC CGATGAATTA CCACGTCACG GGCTCGTTGC GTTTGGGCCA CACCAAGGAG CGCGCGCAGG AATTCAAGCG CGTGCTGGGT ATGGCCGAAT ATCAGGGCAT CGACATGCGG ATGCTGTCGA ATGACGAGGC CAGGAGCATG TATCCGTTCC TGCAAACCCA CGACCTGAGC GGCATTCTCT ACGACCCCTA TGACGGGGAC ATTGACCCGG CGCAATTGAC CCAGGCCATG GCCAAGGGGG CGCGCGATCT GGGCGCGCAG ATCCATCGGT TCACCCCTGC CACCGGCGTG CGACGCGACG TTTCTGGCAA GACCGGGGGC GAGTGGATTG TAGAGACGGG GAAGGGCGAG ATCCGCTGCG AATTCGTGGT GAATGCCGCC GGATATTACG CGCAGCGCGT GGGCGAATGG TTCAAGCCCC ACGGGGGCCG CACGGTGCCG ATGGTCGTCA TGTCCCACCA GTATTTCCTG ACCGAGGAAA TCGGCGCGGT GAAGGACTGG ACGGAGCAGA ATGGCAAGAA GCTGCCGCTG ATCCGTGACG TGGATTCGTC TTACTACCTG CGACAGGACA AAAACGGGCT GAACCTGGGA CCCTATGAAC GCAACTGCAA AGCCCATTGG ATCACGCCCG ACGATCCGAT GCCCGAGGAT TTCAGTTTCC AGTTGTATCC TGACGATCTA GACCGGCTGG AATGGTATAT CGAGGACGCA ATGGAGCGCG TGCCGCTTCT GGGTGAAGGC GGCGTGGGGC GCAACATCAA CGGCCCCATC CCCTACGCGC CCGATGGCCT GCCAATGGTG GGGCCCATGC CCGGCGTGAC CAACGCGTTT GAAGCGCATT CCTTCACCTT CGGCATTGTG CAGGGGGGCG GCGCGGGCAA GGTTCTGTCG GAGTGGATCA TGCATGGCGA GACGGAGTGG GACATGTGGG CCGTCGATCC GCGCCGCTAC ACCGATTACG CCGATCATTC TTACTGTCTG GACAAGGCGT TAGAGACCTA CGGGCATGAA TACGGCATGC ATTTCCCGTG GAAAAGCTGG CCCGCCGGGC GCGACAAGAA GCTGTCTCCG GTGGACGCGA AGGTGCGCGA ATTGGGCGGC CAGATGGGGG CCTATGCGGG GTGGGAACGG GCCAACTGGT TCGCCAAGCC AGGCGATGAC ACGTCCATAG AGGCAACGGA AACCTGGGGC CGCAATGGCC CGTGGGAGCC GCGTGTGAAG GCGGAATGCG AAGCGGTGCG GGACGGGGTT GGCGTGCTGG ACCTGCCGGG GTTCTCTCGG TTCAATCTGT CAGGGGAGGG GGCCGCAGAA TGGCTGCGGG GCCGCATCGC AGGCGCTTTG CCCAAGGTGG GGCGGATGAA CCTGGGCTAT TTTCCGGACA CGCGGGGCCG CATCCTGACG GAGATGTCGC TGATCCGCCA CGAGGAGGAT CACTTCACCC TGATCACCGC CGCGCCCGCC CAATGGCACG ATTTCGAAGT GCTCTGGCGC GATGGCTTGC CCGATGGCGT CAGCCTGACA GATCATACGA CTGAGTTCTC GACCCTCATC GTGACTGGCC CCAAGGCGCG GGATCTGTTT GAGACAATCG GAACCGATGC CGATCTTTCG TTGGGCTGGC TGACGCATCA GACCGCGACA GTTGCCGGGA CACCAGCGTT TCTGGCGCGC GTGTCCTTTG CGGGAGAGCT GGGGTGGGAA ATCCACGCCG CCACGGCTGA CATGCCCGCA ATCTACGATG CCGTGCTGGC CGCCGGGGCC ACCCCCTTCG GGATGTTCGC GCTCAACGCG CTGCGGATCG AGAAGGGATA TCGCGCTTGG AAGGGCGATC TGTCGACCGA TTATACCCTG CTGGAAGGGG GGCTGGAGCG GTTCATCAAA TTCGACAAGC CGCAGGATTT CCCCGGCAAG GCGGCGTTGC TGTCGGAAAA GCAATCGGGC GTGAAGAAGC GCTTCGTTGT CCTTAACGTG GATGCGGGCG AGGCCGACGC GCCCTATATG TCGACGATCA CCCATGGCGG CGATGTGGTG GGCGAGACGA CATCGGGGGC CTGGGGCTAC CGCGTCGGCC ATTCCGTGGC GCTGGCCATG GTCCGCGCTG ACCTGAGCGC GCCCGGAACC GAGCTGAACG TCAACATCTT TGGCGAGGTC TGCAAAGCCA CGGTGCAGGG CGATGGCCCG ATCTGGGATC CCACAAATGA GAGGATCCGC GCGTGA
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Protein sequence | MADLPNTARV VIIGGGVVGT SALYHLAMGG WTDCVLLEKN ELTAGSTWHA AGNCPNFSTS WAVLNMQRYS LEMYRTLAEK VDYPMNYHVT GSLRLGHTKE RAQEFKRVLG MAEYQGIDMR MLSNDEARSM YPFLQTHDLS GILYDPYDGD IDPAQLTQAM AKGARDLGAQ IHRFTPATGV RRDVSGKTGG EWIVETGKGE IRCEFVVNAA GYYAQRVGEW FKPHGGRTVP MVVMSHQYFL TEEIGAVKDW TEQNGKKLPL IRDVDSSYYL RQDKNGLNLG PYERNCKAHW ITPDDPMPED FSFQLYPDDL DRLEWYIEDA MERVPLLGEG GVGRNINGPI PYAPDGLPMV GPMPGVTNAF EAHSFTFGIV QGGGAGKVLS EWIMHGETEW DMWAVDPRRY TDYADHSYCL DKALETYGHE YGMHFPWKSW PAGRDKKLSP VDAKVRELGG QMGAYAGWER ANWFAKPGDD TSIEATETWG RNGPWEPRVK AECEAVRDGV GVLDLPGFSR FNLSGEGAAE WLRGRIAGAL PKVGRMNLGY FPDTRGRILT EMSLIRHEED HFTLITAAPA QWHDFEVLWR DGLPDGVSLT DHTTEFSTLI VTGPKARDLF ETIGTDADLS LGWLTHQTAT VAGTPAFLAR VSFAGELGWE IHAATADMPA IYDAVLAAGA TPFGMFALNA LRIEKGYRAW KGDLSTDYTL LEGGLERFIK FDKPQDFPGK AALLSEKQSG VKKRFVVLNV DAGEADAPYM STITHGGDVV GETTSGAWGY RVGHSVALAM VRADLSAPGT ELNVNIFGEV CKATVQGDGP IWDPTNERIR A
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