Gene Jann_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1544 
Symbol 
ID3933992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1515934 
End bp1516272 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID637903895 
Producthypothetical protein 
Protein accessionYP_509486 
Protein GI89054035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.185841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.304828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCAA CGATGCGCAA ACCAAGAGAC TTCGACGCGG AGCTGACCGC ACTAGAGGCG 
AAGGCAAGGG CCCTGAAGAC CCGCAAGGTG CAGCAGCTTG GTGAGTTGGT CGTCGCCACC
GGGGCCGATG CGTTCAATGT GGAAGAGCTG GCCGGTGCCA TGATCGTGCT GGCCGAGACC
ACGGATACCG GCAAAAGGGA GGCCTGGGCG AAGCGCGGGG CCGCGTTCTT TCAAGGCCGG
ACGCGGAGAC CTGCAAAGGC AGATGAACGC AACGCGAAGA GCGCTCCAGC GCAATCTGAC
AGCCCGCAAT CGGCACCAAG CGAAAAAGGC GCGAGGTGA
 
Protein sequence
MEATMRKPRD FDAELTALEA KARALKTRKV QQLGELVVAT GADAFNVEEL AGAMIVLAET 
TDTGKREAWA KRGAAFFQGR TRRPAKADER NAKSAPAQSD SPQSAPSEKG AR