Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1503 |
Symbol | |
ID | 3933950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1473434 |
End bp | 1474615 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637903853 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_509445 |
Protein GI | 89053994 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGT CATATTCACC GAAAGAGCTG GCTTTTCAGG CCGAGGTTCG CGCCTTTCTG GCCGCGTCCC TGCCTGCGGA TATTGCCGCG CGCGTGGCCT CCGGCGCCGG CGCGACGAAG GCGGATATGG AGGCGTGGCA CGCGATCCTG AACGACAAGG GTTGGCTTGG CGGGACCTGG CCTGCGGCGC ATGGGGGATG CGATTGGGGG CCGATTGAGC TGCACATTTT TGAAGAGGAA AGCGCGCTGG CCAATGCCCC GCGGATCGTA CCTTTTGGTC TTAAAATGCT GGGGCCGGTG CTGATGAAAT TCGGCACGGC AGAGCAGCAG GCTGACTACT TGCCTCGCAT TCTGGACGGG CGCGATTGGT GGTGCCAGGG CTATTCCGAG CCCGGCGCAG GCAGCGATCT GGCCTCCCTG AAGACCCGCG CAGACCGCGA CGGCGACGAC TATATCATCA ACGGGCAAAA GACCTGGACG ACCTACGGCC AATACGCCAA CCGCATCTTT TGTCTGGTGC GCACCAAATT TGATGGGAAG CCGCAGGCCG GGATCAGCTT CGTGCTGATC GACCTGGAGA CGCCGGGGAT CGAGATGCGC CCGATCCGCC TGATCGAGGG CGGGTTTGAG GTAAACGAGG TGTTCTTCAC CGACGTCCGC GTGCCTGTCG CCAATCGGGT GGGGGAGGAA AACGCGGGCT GGACCATCGC GAAATATCTG CTGGGGCATG AGCGCACGAA CATTGCCGGA ACCGGCTTTT CGGTTCAGGC GCTGGAAAAG GTGAAGGGGC TGGCACGGGG AGTGATGCGC GGTGGTAAGC CCTTGATCCA GAACGCGTTG TTCGCGGCCC GCCTGGCGGA AGTGGAGGCT GAGTTGGAGG CCGTGAAGAT CACCAACCTG CGGATGCTGT CGAAGGCGGC GGCGGGCGGG CAGCTCGGCG CGGAGCCGTC CATGCTGAAG ATCAAGGGCA CCGTGATCCG GCAGGCGCTG AATGATCTGT CGCGCCGCGC CCTTGGCCCC GCGGCGGCCC CCTTCCCGTC CGAAGACCTC GACAATCTGG CGATCACGCC ACCGGGCCAC GCCCACAACG CGGCGGGGTA TTTCAACAAC CGCAAAATCT CCATCTACGG CGGCTCGAAC GAGATCCAGC GCAACATTCT GGCCAAGGGA TTGATGCAGT GA
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Protein sequence | MDLSYSPKEL AFQAEVRAFL AASLPADIAA RVASGAGATK ADMEAWHAIL NDKGWLGGTW PAAHGGCDWG PIELHIFEEE SALANAPRIV PFGLKMLGPV LMKFGTAEQQ ADYLPRILDG RDWWCQGYSE PGAGSDLASL KTRADRDGDD YIINGQKTWT TYGQYANRIF CLVRTKFDGK PQAGISFVLI DLETPGIEMR PIRLIEGGFE VNEVFFTDVR VPVANRVGEE NAGWTIAKYL LGHERTNIAG TGFSVQALEK VKGLARGVMR GGKPLIQNAL FAARLAEVEA ELEAVKITNL RMLSKAAAGG QLGAEPSMLK IKGTVIRQAL NDLSRRALGP AAAPFPSEDL DNLAITPPGH AHNAAGYFNN RKISIYGGSN EIQRNILAKG LMQ
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