| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1482 |
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| Symbol | |
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| ID | 3933929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1452752 |
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| End bp | 1454395 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903832 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_509424 |
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| Protein GI | 89053973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT TATCGGCCCG TAGCGCACCG TTTCTGGTGC TGCTCCTCGC GCTGGTCAGT
TTTGGTGTCG GACTTGCTGA ATTGCCCGTC CAGGACCGGG ATGAAGCGCG CTTTGCCCAA
GCAGCGCGCC AGATGGCCGC AACGGGCGAC CTGATAGACA TCCGCCTGCA AGACGCCCCG
CGCCACAACA AACCGGCCTT GATTTACTGG GCGCAGACGG CTGCAATCTG GATCACGGGC
GCATCGGGAG AGACACCGAT CTGGGTCCAC CGCCTGCCCT CCTACCTCGC TGGCGCGCTC
TCGGCACTCG CGATGATCTG GGCTGGCACG CCGCTGGTCG GTCGGCGCGC AGCGGTCATC
GCGGGGGTGA TCTGCGCGAC CATCTACATG CTTCATGCAG AGGCGCGCAC GGCGAAAACG
GACGCGGCCC TGTTGCTGGC GGTCATCCTG GCTATGGGCG CCATGGGCCG GGCGTGGCTG
GATATCGCGC GACCTTGGTT AACGCCGTTC ATCTTCTGGA CGGCGCTGGC GGCAGGGTTC
CTTTTGAAGG GACCCATGGT CGCCCTGCCC ATGATCGGTG CAATCATTTG GATCGCGGTT
CAGTTCCGCC GCGTACACTG GCTCTTGCGG CTGCGGCCTT TGCCGGGTGC AATCCTGTTT
GCCGCTCTCA CCGCGCCTTG GTTTATTGCG ATCACCTTGG TCACGGACGG CGCGTTCTGG
AGCGCCTCTC TCGGCGGCGA TCTGTCCGAC AAGATCACCG CGGACGGAGA GCACGCCGCC
TCTCCACCGG GCTTCTACCT GCTCACGATC TGGTTCACCT TCTTCCCGTG GAGCCTGTTG
ATTCCATTGG CGATCTCCTA CGCCTGGATG TTCCGAAGCG ACCCGAAAAC GGCGTTCTTG
TTGGGCGTCC TTATCCCCGG ATGGATCGTG TTTGAGGCCG TGCCGGTGAA GCTCATCCAC
TATACCCTAC CGCTCTATCC CGCGCTCATG TTGCTGTGCG GCGCGGCGAT GGTCCGCGTC
TTTGACGGCA CGTTGCGTCT CTCGCGATGG GCCCGCGCAA TCGGCAGCAT CGGCTGGCTC
ATCGCGCTGG CGTTTTTCAC GGCAGTCGCT GTGGTCTTGC CAGTCGCCTA CGGACCGGCG
GAGGGGGTTC ACATCCCCTC CACCCTCGGC GCGCTGGTCT TTTGTGGCGC GGGCCTCGTG
GGCCTCATCC TGTTTTGGCG CAACGTGCTA CCCGGGGCCA TCGCTGCGCT GGCGCTCTGC
GGAGTTGTCA TGGGCTGGAC GCTGACAGCC GCAAGCCTGC CCGCCGCGCG GGATTTCTGG
ATCGCGGATC AGATCACAGA GGCGATGTCC GCCAATGCCT GCCTGACGGG ACCGGTAGCT
CTTGCCGGAT ACGCAGAACC CTCGTCGGTG TTTCGCCTCG GCACCGATAC GATCCTGACG
GACGCGGATG GTGCGCTCGC CTACCTGGCG GACGGTGCCA ATCGCGCTGC GTGGATTGAT
CCCGCGCTGA TCTCAAACGC GCCGAACAAC GCGGAGGCCG CCCCAACGAT TAACGGAATG
TCGATTGGGA ACTTCCGGCC CGTTCAACTT CGCCTCTACG TGTCCCCCGG TGTCCCGGCC
GCGGCCGATC CCTGCGCAGG TTAA
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| Protein sequence | MTLLSARSAP FLVLLLALVS FGVGLAELPV QDRDEARFAQ AARQMAATGD LIDIRLQDAP
RHNKPALIYW AQTAAIWITG ASGETPIWVH RLPSYLAGAL SALAMIWAGT PLVGRRAAVI
AGVICATIYM LHAEARTAKT DAALLLAVIL AMGAMGRAWL DIARPWLTPF IFWTALAAGF
LLKGPMVALP MIGAIIWIAV QFRRVHWLLR LRPLPGAILF AALTAPWFIA ITLVTDGAFW
SASLGGDLSD KITADGEHAA SPPGFYLLTI WFTFFPWSLL IPLAISYAWM FRSDPKTAFL
LGVLIPGWIV FEAVPVKLIH YTLPLYPALM LLCGAAMVRV FDGTLRLSRW ARAIGSIGWL
IALAFFTAVA VVLPVAYGPA EGVHIPSTLG ALVFCGAGLV GLILFWRNVL PGAIAALALC
GVVMGWTLTA ASLPAARDFW IADQITEAMS ANACLTGPVA LAGYAEPSSV FRLGTDTILT
DADGALAYLA DGANRAAWID PALISNAPNN AEAAPTINGM SIGNFRPVQL RLYVSPGVPA
AADPCAG
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