| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1425 |
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| Symbol | |
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| ID | 3933872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1394837 |
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| End bp | 1395787 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903775 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_509367 |
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| Protein GI | 89053916 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000184688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.493371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAT TTTTCAAAAC CCTGGCTGTT TCCGCCGTCG CCCTGATGGG TGCCACGGCC
GTGAACGCCG ACGGCCATAT CGGCGGGGAG CGCTATGTGC TGGTCAGCCA CGCGCCCGAC
AGTGACAGCT GGTGGAACAC GATCCGCAAC GCCCTGACAC TGGCGGGCGA GCAGATGGAT
GTGGAAGTGG AATACCGCAA CCCGCCTACC GGTGACATCG CCGACATGGC GCGTCTGATC
GAGCAGGCGG CGGCCTCTGG CCCCGACGGC ATCATCACGA CGCTGGCGGA CCCGACGGTT
CTGAACGATT CCATTCGCGC CGCCGTAGAT GCGGGCATCG ACGTGATCAT CATGAATTCC
GGCACGCCGG AGCAGGCGCG CGACGTGGGC GCTTTGATGT ATGTGGGTCA GCCCGAATAT
GACGCAGGTT TTGCCGCCGG TCAGCGCGCG GCAGGCGATG GCGTGACCAG CTTCCTGTGC
GTGAACCACG TGATCTCCAA CCCCGTCGTG GCCGAGCGCT GCAACGGCTT TGCGGACGGT
CTGGGCGTGG ATCTGGGCGA CAGCATGATC GACGCAGGTC AAGACCCGCA GGAGATCCAG
AACCGGGTCA TGGCGTATCT GAATGCCAAC CCCGATACGG ACGGCATCCT GACGCTCGGG
CCGACCTCTG CCGATCCCAC CATCCTGGCG CTGGAAGAGC TTGGCCTGGC CGGTGACATC
TACTTCGGCA CGTTTGATCT GGGCGAAAAC ATCGTGGCGG GCATCCGCGA CGGCGTGATC
GAATGGGGCA TCGACCAGCA GCCGTTCCTG CAGGCCTACC TGCCGGTCGT CGTGATGACC
AACTATCACC GCTATGGCGT GCTGCCGGGC AACAACATCA ACTCCGGCCC CGGTTTCATC
ACCGCTGACG GTCTGGAGCT GGTGGAAGCG CTGGCGGGCG AATACCGCTA A
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| Protein sequence | MNAFFKTLAV SAVALMGATA VNADGHIGGE RYVLVSHAPD SDSWWNTIRN ALTLAGEQMD
VEVEYRNPPT GDIADMARLI EQAAASGPDG IITTLADPTV LNDSIRAAVD AGIDVIIMNS
GTPEQARDVG ALMYVGQPEY DAGFAAGQRA AGDGVTSFLC VNHVISNPVV AERCNGFADG
LGVDLGDSMI DAGQDPQEIQ NRVMAYLNAN PDTDGILTLG PTSADPTILA LEELGLAGDI
YFGTFDLGEN IVAGIRDGVI EWGIDQQPFL QAYLPVVVMT NYHRYGVLPG NNINSGPGFI
TADGLELVEA LAGEYR
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