| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1412 |
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| Symbol | |
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| ID | 3933859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1381746 |
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| End bp | 1382282 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903762 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_509354 |
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| Protein GI | 89053903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.210554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0626613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA AACCCGGCCC CCTGCGCCGT GCCCTCGACG GGCTTTATAC GTTGTCCGGC
GTGGCTGCCG CCCTGTGCCT GATCGCGATC CTCTTGCTGA TCGTGGCCCA GATGGTCGCC
CGCTGGACTG GCGACATCTT CCCCGGCGCG CCCAATTATG CGGGCTACAT GATGGCCGCC
GCCAGCTTTC TGGCCTTCGC CAATGCGCTC AATGGGGGCG CGCATATCCG CGTGTCGATC
CTGCTGAACG CCGTGCCGCC CCGCATCAAA TGGGTGTTGG AGGTCTGGTG TTTCGCCGTC
GCGACCGCGA CAATCGCCTA CTTCGTCTAC TACGCCTACT GGTTCGTCTA TTGGTCCTGG
CGCTTCAACG AGGTCTCGCA GGCGCAGGAC GCCACACCAC TCTGGATCCC GCAATCGGTC
ATGGTCGTGG GCGGTGTGAT CCTGCTGATC GCCTTCTTCG ACAACCTCGT TTCCGTCCTT
CTCAAGGGCA ACCACCGCAT CGGCGACAAC ACCGTCGATC AAAGCTTCGG GGAATGA
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| Protein sequence | MSDKPGPLRR ALDGLYTLSG VAAALCLIAI LLLIVAQMVA RWTGDIFPGA PNYAGYMMAA
ASFLAFANAL NGGAHIRVSI LLNAVPPRIK WVLEVWCFAV ATATIAYFVY YAYWFVYWSW
RFNEVSQAQD ATPLWIPQSV MVVGGVILLI AFFDNLVSVL LKGNHRIGDN TVDQSFGE
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