| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1402 |
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| Symbol | |
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| ID | 3933849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1371738 |
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| End bp | 1372292 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903752 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_509344 |
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| Protein GI | 89053893 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00264057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCGTT CCGAAATCCT GCGCGACATT GCGCCCATCC TGAACCCGCA CCTTGTTGTT
TGTAACATCG GTCTTCCCAG CCAAGAACTG CACATGATCG ACGACAACGC GCGCAACTTC
TACATGCTTG GCACGATGGG GCTGTCGTCC TCCATCGGCC TTGGTCTGGC GCTGGCGCAA
GACAAGACGG TGATCTCCAT CGATGGCGAC GGGTCCGTTC TGACGAACCT CGGCACGCTG
CCGACCATCG CCAACAACGT GGCCGACAAT TTCATCCTGC TGATCATCGA CAACGGCTCC
TATGGGTCCA CCGGCGATCA GCCGACCTAT GCGGGCAAGC TGACGAAGCT GGAGAATGTC
GCGAAGGCCT GCGGGTGTGA GAATGTGGTG GTCTGCGATG ACGTCGACAC CGGCAAGACG
CTGCAAGCGG CCATCGACAG CAAGCAGATG ACGATCATCG TGTCCAAATG CGACAGCGGC
AACATCAAGC TGCCCGTCAT CACCATGGAT CCGGTCGTGA TCCGCGCCCG CTTCATGGAC
GCGGTGGCAA GCTGA
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| Protein sequence | MIRSEILRDI APILNPHLVV CNIGLPSQEL HMIDDNARNF YMLGTMGLSS SIGLGLALAQ
DKTVISIDGD GSVLTNLGTL PTIANNVADN FILLIIDNGS YGSTGDQPTY AGKLTKLENV
AKACGCENVV VCDDVDTGKT LQAAIDSKQM TIIVSKCDSG NIKLPVITMD PVVIRARFMD
AVAS
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