Gene Jann_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1319 
Symbol 
ID3933766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1283624 
End bp1284574 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID637903669 
Producthypothetical protein 
Protein accessionYP_509261 
Protein GI89053810 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.668778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CAACCCTGTC CACCGCCGCC ACCCTTCTGG CCACCTCGGC CATGGCCGAC 
ATCACAACCC GCACCGTGAC CTTCGAGAAC GAAGGCGCCA CGCTGACCGG CACGCTGTAC
TTGCCAGCGG ATCACAACGG GGTCGCCCTG CCGACCGTCG TCGTGACCGG TGCCTGGACC
TCCGTCCAAC AGCAGATGCC CGCCACATAC GCCGCCCAAA TGGTGGAACG TGGCTTTGCG
GCCTTCACCT TCGACTTCCG CGGCTGGGGC GCATCGGGCG ATCTGCCGCA GAACGTCCGC
TTCGTGGAAA GCCCCGAGGC CAAAACCTCT GACATCCGCG CCGCATTTGA ATTTGTCGCC
ACGCTGCCAG AGGTGGATGC AGGCCAAATC TACGGCCTCG GGATCTGTGC ATCGGCTGGC
TACATGGTAG ACGCCGCCGC CGGGAACGAT CTGGTGCAGC GCGTGGGCCT CGTCGCCCCT
TGGCTGCAAA ACGAGGATTT GGTGAATGCG GTCTATGGCG GTGCCGAAGG CGTCAATGGC
CTGATTGAGA TGGGCCGCGC TGCCGAGGCC GCAGGAGGTC AGATCATTCC TGCCGTCGGT
CCGGAAGGGG CCGAGGGCGT GCTGATGCCC ATCGGTGGCT ACTATTATGA GGCCGACCGT
GGCGCGATCC CCCAGTACGA CAACCAGTGG AACAACGCGT CGTGGGAAGG CTGGCTGACC
TATCACCCCG CCGATAACCC GTCGCGTCTG ACGCAGCCCT TGGCCATCGT TCATTCCGAG
GCCGCCGCGA TCCCGGATGG CGTGCGCGCC TTCCTGGACG GGTTCACCGG CGAGGCGACA
CAGCAATGGC TCGAAGACGT CACGCAGTTC GACTTCTACG ACAACCCCGC GGATGTAACC
CGCGCCGCCG ATACCGTGGC CGATCACTTC CGCGCAGGCA CTGACGCCTG A
 
Protein sequence
MKLATLSTAA TLLATSAMAD ITTRTVTFEN EGATLTGTLY LPADHNGVAL PTVVVTGAWT 
SVQQQMPATY AAQMVERGFA AFTFDFRGWG ASGDLPQNVR FVESPEAKTS DIRAAFEFVA
TLPEVDAGQI YGLGICASAG YMVDAAAGND LVQRVGLVAP WLQNEDLVNA VYGGAEGVNG
LIEMGRAAEA AGGQIIPAVG PEGAEGVLMP IGGYYYEADR GAIPQYDNQW NNASWEGWLT
YHPADNPSRL TQPLAIVHSE AAAIPDGVRA FLDGFTGEAT QQWLEDVTQF DFYDNPADVT
RAADTVADHF RAGTDA