Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1267 |
Symbol | |
ID | 3933713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1227800 |
End bp | 1228915 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903616 |
Product | polyamine ABC trasnporter, periplasmic polyamine-binding protein |
Protein accession | YP_509209 |
Protein GI | 89053758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.469516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.704416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCA AGAGCCTTAT GCTCCTGACA ACCGGCGCCA GCATGGCCGC CACCGGCGCG ATGGCCGACG GCCACATGGC CAGTTCCATG ACCCTCGTGT CCTGGGGCGG CGCCTATCAG GCCAGCCAGA CCAACGCCTA TTCCGATCCC TACGCCGCCA TGCATGACGG TCTGGAGATC ATCTGGGACG AAAGCTCGGC CGAGGCCGTG GCCCGTCTGC GCGCCATGAA CGAGGCGGGC AACATCACCT GGGACCTCGT GGACGTTGTG GCCGCTGACG CCATCCGCCT CTGCGACGAA GGTCTGGCGA TGGAAATCGA CCATGACGAG ATGCTGGCCC CGGCCCCCGA TGGTACGCCA GCGTCCGAGG ATTTCGGCGA TCTGATCGTG TCCGACTGCT TCATCCCGCA GATCGTGTAT TCCACCACGG TGGGGTATCG CACGGACGTG GCAGAGTGGA ACGGCAACAC GCCGTCCGAC ATCTGCGCGA TTTTCGATAC CGAAGCGTTC CCCGGTCAGC GGTCGCTGGA GCGTCGTCCG ATCGGCAACC TGGAATGGGC GCTGATCTGT GACGGCGTCG CGATGGAAGA TGTCTACGAC GTGCTTGAGA CGGAAGAGGG TGTGGAGCAA GCCTTCGCAA TGCTCGACAC GATCCAGGAC CAGACCGTTT GGTGGTCCGC CGGTGCAGAC ACGCCCCAGC TTCTGGCTGA CGGCGAAGTT GTCATGGGCT CCACCTATAA CGGTCGTTTG TTCTCTCTGA TCGAGGAGCA GGACCAGCCC GTCGCCATGC TGTGGGACGC GCAGGTGTTC GACCTTGACG GTTGGATCAT CCCCGAGGGG CTGCCCGAGG ATCGCCTGGC CCGTACGCTG GACTTCGTGC GCTTCGCCAC GGACACACAG CGTCTGGCCG ATCAGTCGCG CTGGATCTCC TACGGTCCCG CACGCGCCTC TTCCGCGCCT CTGGTTGGCA CGCATGCCGA TCTGGGCATC GAGATGGCAC CGCATATGCC AACCGACCCG GCCAATGCCG AGCGGACGTT CCTGTTCAAC TACGAGTGGT GGGCCGACTA CCGCGACGAC ATGGACGCCC GTTTCCAGGC GTGGTTGGCG CAATAA
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Protein sequence | MNLKSLMLLT TGASMAATGA MADGHMASSM TLVSWGGAYQ ASQTNAYSDP YAAMHDGLEI IWDESSAEAV ARLRAMNEAG NITWDLVDVV AADAIRLCDE GLAMEIDHDE MLAPAPDGTP ASEDFGDLIV SDCFIPQIVY STTVGYRTDV AEWNGNTPSD ICAIFDTEAF PGQRSLERRP IGNLEWALIC DGVAMEDVYD VLETEEGVEQ AFAMLDTIQD QTVWWSAGAD TPQLLADGEV VMGSTYNGRL FSLIEEQDQP VAMLWDAQVF DLDGWIIPEG LPEDRLARTL DFVRFATDTQ RLADQSRWIS YGPARASSAP LVGTHADLGI EMAPHMPTDP ANAERTFLFN YEWWADYRDD MDARFQAWLA Q
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