| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1252 |
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| Symbol | lipB |
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| ID | 3933697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1207524 |
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| End bp | 1208174 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903600 |
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| Product | lipoyltransferase |
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| Protein accession | YP_509194 |
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| Protein GI | 89053743 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.33407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGAAT GGATCACCTC GGACGCGCCC GTCCCCTACC CCCTCGCCGT GGCCGAGATG
GAGGCGCGCG CCAACGCCAT CGCGAAAGGT GAGGCCGGAG AGGCGGTGTG GCTCCTGGAA
CATCCCCCGC TTTATACGGC GGGCACGTCT GCCAGAGAGA GCGATCTGCG GGACCCGGAC
CGCTTCCCCG TTTTCGAGAC GCGACGCGGC GGGCAGTACA CGTATCACGG CCCGGGCCAG
CGAGTGGCTT ACGTCATGCT GGACCTGAAC ACACGCGGCA AGGACGTGCG CGCCTTCGTG
CAAAGGCTGG AGGCCTGGGT CATCGCGGCT CTGGATGATT TCAACGTCAC CGGCGCGGTG
CGGGAGGGGC GCGTGGGCGT CTGGGTGGAT CGCCCCGAAA AGGCGCCGCT CCCCGATGGG
ACGCCGCGCG AGGACAAGAT TGCCGCCATC GGCGTGCGCC TGCGCAAATG GGTCAGCTTT
CACGGCCTGT CGATCAATGT GGAGCCGGAC CTGAGCCATT TTGATGGGAT CGTGCCCTGC
GGCATCGAGG GACACGGGGT GACCAGCCTT GTGGATCTGG GCCTTCCGGT GACGATGGCG
GATCTGGACG TCGCCCTGAA GCGGCAGTTT TTTGAGGTGT TCGGGGCCTG A
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| Protein sequence | MVEWITSDAP VPYPLAVAEM EARANAIAKG EAGEAVWLLE HPPLYTAGTS ARESDLRDPD
RFPVFETRRG GQYTYHGPGQ RVAYVMLDLN TRGKDVRAFV QRLEAWVIAA LDDFNVTGAV
REGRVGVWVD RPEKAPLPDG TPREDKIAAI GVRLRKWVSF HGLSINVEPD LSHFDGIVPC
GIEGHGVTSL VDLGLPVTMA DLDVALKRQF FEVFGA
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