Gene Jann_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1247 
Symbol 
ID3933692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1202933 
End bp1203391 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID637903595 
Producthypothetical protein 
Protein accessionYP_509189 
Protein GI89053738 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.427539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.989851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGC GGACCAAAAT CACCGACGGA ATTAAGAACG CGATGCGCGA GAAGGACACG 
GTGCGCCTGT CGACGCTGCG TCTGATCAAT GCGGCCGTGA AAGATCAGGA CATCGCGGTG
CGCGCCAAGG GCAATGCGGA CGGGGTGCCG GATGCTGAGG TCCTGTCGAT CATGGCCAAG
ATGGTCAAGC AACGTCAGGA AAGCGCCCGG GTCTACGAGG AAGCGGGTCG GTTGGAACTG
GCCGAGCAGG AGCAGGCGGA GATTGCCGTC ATCGAGGACT ACCTGCCGCG CCAACTGTCT
GACGAAGAGG TCGCCAAGGC GGTTGATACG GCCATTGCAG AGGCGGGGGC GGACAGCATC
CGCGATATGG GCCGCGTGAT GGGCGCGCTG AAGGGCAAAT ATGCGGGCCG GATGGATTTT
GGAGCGGTGG GGCCGCTGGT GAAGGAGCGG TTGAGCTGA
 
Protein sequence
MGLRTKITDG IKNAMREKDT VRLSTLRLIN AAVKDQDIAV RAKGNADGVP DAEVLSIMAK 
MVKQRQESAR VYEEAGRLEL AEQEQAEIAV IEDYLPRQLS DEEVAKAVDT AIAEAGADSI
RDMGRVMGAL KGKYAGRMDF GAVGPLVKER LS