| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1219 |
|---|
| Symbol | |
|---|
| ID | 3933664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1178607 |
|---|
| End bp | 1179290 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903567 |
|---|
| Product | negative regulator of AmpC, AmpD |
|---|
| Protein accession | YP_509161 |
|---|
| Protein GI | 89053710 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACAGCTA AATCTTTGCA AAGCCCCAAT TTCGGGCCAA GGCGCGATGG GTTGAAGCCA
GAGTTGGTTG TGATCCACTA CACCGCGATG CCGAACTGCG CATCAGCCGC AAAAGTGCTG
TGCGACCCGG CGCGGGAGGT CTCCGCCCAT TATTTGATCG GGCGCGATGG CGACGTGTTG
AACCTTGTGC CAGAGGACAT GCGCGCTTGG CACGCAGGCA AGGGCGAATG GCGCGGGGCG
GGGGATGTGA ACTCCCGCTC GATCGGGATC GAGTTGGACA ATGACGGGCT GACGCCCTTC
TCCGAGCCGC TGATGGCGGC GCTCGAAACG CTCCTCCCTA CGGTCCTCGC CGCATGGCGG
ATTGGGCCAG ACGGCGTGAT CGGGCATTCA GACATGGCCC CGGGGCGCAA AATTGACCCC
GGCAGGCGGT TTGACTGGCA ACGACTGGCG CGGCAGGGAT TGGCAGTGTG GTCGCAGGCC
TCCGGCGATA CGGTTGATGC AGCGCGGTTT CGGGGCGATG CACAGGCTTT TGGGTATGGA
GACATGGACG ATACGCTGCT GCTGGACGTG GTGCGGATGC GGTTCCGGCC CTGGGCGTCC
GGTCCGCTGG ATGGAACCGA CTGCGCGATC ATGGCGGACA TTGCGGCACG CTATGGGCTT
GACCGGCGCG GGCCGGGCGC ATAG
|
|---|
| Protein sequence | MTAKSLQSPN FGPRRDGLKP ELVVIHYTAM PNCASAAKVL CDPAREVSAH YLIGRDGDVL
NLVPEDMRAW HAGKGEWRGA GDVNSRSIGI ELDNDGLTPF SEPLMAALET LLPTVLAAWR
IGPDGVIGHS DMAPGRKIDP GRRFDWQRLA RQGLAVWSQA SGDTVDAARF RGDAQAFGYG
DMDDTLLLDV VRMRFRPWAS GPLDGTDCAI MADIAARYGL DRRGPGA
|
|---|
| |