| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1212 |
|---|
| Symbol | |
|---|
| ID | 3933656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1171627 |
|---|
| End bp | 1172490 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637903560 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509154 |
|---|
| Protein GI | 89053703 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCATA AGACCTGCGC GCCCGATCAG GCGTTGACCC GGATCGCAGA TGCGTTGGAG
CGTTTGCGTC CCAGGCCCGC TGCGGCTCCT GATATGGATG TAGCGGAGGC ATTCGTCTGG
ACCGCAGAAC CCGACGGGCT TGAGCCCGTC GCCCATGTGA ACCGCATCGA CCTGGGGTTG
CTTCACGGCA TCGACCGGGC CCGTGATACG CTGATGGCCA ATACACGGCA GTTCGCGCGC
GGGTTGCCCG CCAACAACGC CTTGTTGTGG GGCGCGCGGG GGATGGGAAA ATCCTCTCTC
GTCAAGGCAG TCCATGGTGC GATCGCGGAG GAAGAGCCTG CGCTGAAGCT GGTTGAAATC
CAGCGCGAAG ATCTGCCATC GGTGGGCCGC CTTCTGGCCC TTCTGCGGCA GGTGGAGACG
CAGGTGATCC TGTATTGCGA TGACCTGTCG TTCAGCCATG ATGACCAGCA CTACAAGTCC
CTGAAGGCAG TGCTGGATGG CGGTGTGACG GGTCGTCCCG ACAATGTGGT GTTCTATGCC
ACGTCCAATC GCAGGCACCT TATGCCGAGG GACATGATAG AGAACGAGCG TGGATCCGCG
ATCAACCCGA GTGAGGCGGT GGAAGAAAAA GTGTCCCTGT CCGACCGCTT TGGCCTGTGG
CTTGGCTTCC ACGCCTGCGA TCAGGACGCT TATCTGGCGA TGATCCGGGG ATATTGCGAC
GCCTATGGCG TAGACATCTC GGACAAGGAG ATCCGGGCAG AAGCGATTGA ATGGCAGGCA
ACGCGAGGCT CCCGCTCTGG CCGTGTGGCG TGGCAGTATT TCACCGATCT CGCCGGTCGC
CGGGGCGTTG TAATTTCAGC CTGA
|
|---|
| Protein sequence | MSHKTCAPDQ ALTRIADALE RLRPRPAAAP DMDVAEAFVW TAEPDGLEPV AHVNRIDLGL
LHGIDRARDT LMANTRQFAR GLPANNALLW GARGMGKSSL VKAVHGAIAE EEPALKLVEI
QREDLPSVGR LLALLRQVET QVILYCDDLS FSHDDQHYKS LKAVLDGGVT GRPDNVVFYA
TSNRRHLMPR DMIENERGSA INPSEAVEEK VSLSDRFGLW LGFHACDQDA YLAMIRGYCD
AYGVDISDKE IRAEAIEWQA TRGSRSGRVA WQYFTDLAGR RGVVISA
|
|---|
| |